Evidence map›Paper›PMID 22115599›Full record

ArticleNanomedicine : nanotechnology, biology, and medicine2012

Nanoresonator chip-based RNA sensor strategy for detection of circulating tumor cells: response using PCA3 as a prostate cancer marker.

James A Sioss, Rustom B Bhiladvala, Weihua Pan, Mingwei Li, Susan Patrick, Ping Xin, Stacey L Dean, Christine D Keating, Theresa S Mayer, Gary A Clawson

Open access · greenAbstract read
In one paragraph

Article in Nanomedicine : nanotechnology, biology, and medicine, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 38 citations in OpenAlex.

  1. Article
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  3. The long non-coding RNAOncotarget · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

James A SiossDepartment of Chemistry, Pennsylvania State University, University Park, Pennsylvania, USA.
Rustom B Bhiladvala
Weihua Pan
Mingwei Li
Susan Patrick
Ping Xin
Stacey L Dean
Christine D Keating
Theresa S Mayer
Gary A Clawson
Pennsylvania State University · USHershey (United States) · US

Funding

An RNA Sensor for Detection of Circulating Tumor CellsR33CA118591 · NCI · PENNSYLVANIA STATE UNIV HERSHEY MED CTR · PI CLAWSON, GARY A · 2006 to 2008
$862k
NCI NIH HHS R33 CA118591
6 · The paper itself

Abstract

There is widespread interest in circulating tumor cells (CTCs) in blood. Direct detection of CTCs (often < 1/mL) is complicated by a number of factors, but the presence of ∼10(3) to 10(4) copies of target RNA per CTC, coupled with simple enrichments, can greatly increase detection capability. In this study we used resonance frequency shifts induced by mass-amplifying gold nanoparticles to detect a hybridization sandwich bound to functionalized nanowires. We selected PCA3 RNA as a marker for prostate cancer, optimized antisense binding sites, and defined conditions allowing single nucleotide mismatch discrimination, and used a hybrid resonator integration scheme, which combines elements of top-down fabrication with strengths of bottom-up fabrication, with a view to enable multiplexed sensing. Bound mass calculated from frequency shifts matched mass estimated by counting gold nanoparticles. This represents the first demonstration of use of such nanoresonators, which show promise of both excellent specificity and quantitative sensitivity.

Indexed as

Antigens, NeoplasmBiomarkers, TumorBiosensing TechniquesBlood Chemical AnalysisEquipment DesignEquipment Failure AnalysisHumansMaleMicro-Electrical-Mechanical SystemsNanotechnologyNeoplastic Cells, CirculatingRNAAntigens, NeoplasmBiomarkers, Tumorprostate cancer antigen 3, humanRNA

Identifiers

PMID22115599
PMCPMC3290699
OpenAlexW1993842491

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.