Evidence map›Paper›PMID 22114689›Full record

ArticlePloS one2011

Boron stress activates the general amino acid control mechanism and inhibits protein synthesis.

Irem Uluisik, Alaattin Kaya, Dmitri E Fomenko, Huseyin C Karakaya, Bradley A Carlson, Vadim N Gladyshev, Ahmet Koc

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 60 citations in OpenAlex.

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  16. Boric acid induces cytoplasmic stress granule formation, eIF2α phosphorylation, and ATF4 in prostate DU-145 cells.Biometals : an international journal on the role of metal ions in biology, biochemistry, and medicine · 2015
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Irem UluisikIzmir Institute of Technology, Department of Molecular Biology and Genetics, Izmir, Turkey.
Alaattin Kaya
Dmitri E Fomenko
Huseyin C Karakaya
Bradley A Carlson
Vadim N Gladyshev
Ahmet Koc
Izmir Institute of Technology · TRCenter for Cancer Research · USHarvard University · USUniversity of Nebraska–Lincoln · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Boron is an essential micronutrient for plants, and it is beneficial for animals. However, at high concentrations boron is toxic to cells although the mechanism of this toxicity is not known. Atr1 has recently been identified as a boron efflux pump whose expression is upregulated in response to boron treatment. Here, we found that the expression of ATR1 is associated with expression of genes involved in amino acid biosynthesis. These mechanisms are strictly controlled by the transcription factor Gcn4 in response to boron treatment. Further analyses have shown that boron impaired protein synthesis by promoting phosphorylation of eIF2α in a Gcn2 kinase dependent manner. The uncharged tRNA binding domain (HisRS) of Gcn2 is necessary for the phosphorylation of eIF2α in the presence of boron. We postulate that boron exerts its toxic effect through activation of the general amino acid control system and inhibition of protein synthesis. Since the general amino acid control pathway is conserved among eukaryotes, this mechanism of boron toxicity may be of general importance.

Indexed as

Amino AcidsAminoacylationBasic-Leucine Zipper Transcription FactorsBiomarkersBlotting, WesternBoroneIF-2 KinaseGene Expression ProfilingMembrane Transport ProteinsOligonucleotide Array Sequence AnalysisPhosphorylationProtein BiosynthesisProtein Serine-Threonine KinasesReal-Time Polymerase Chain ReactionRNA, MessengerRNA, TransferAmino AcidsATR1 protein, S cerevisiaeBasic-Leucine Zipper Transcription FactorsBiomarkersBoroneIF-2 KinaseGCN2 protein, S cerevisiaeGCN4 protein, S cerevisiaeMembrane Transport ProteinsProtein Serine-Threonine KinasesRNA, MessengerRNA, TransferSaccharomyces cerevisiae Proteins

Identifiers

PMID22114689
PMCPMC3219688
OpenAlexW2068234346

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.