Evidence map›Paper›PMID 22114317›Full record

ArticleRNA (New York, N.Y.)2012

The zipcode-binding protein ZBP1 influences the subcellular location of the Ro 60-kDa autoantigen and the noncoding Y3 RNA.

Soyeong Sim, Jie Yao, David E Weinberg, Sherry Niessen, John R Yates, Sandra L Wolin

Open access · bronzeAbstract read
In one paragraph

Article in RNA (New York, N.Y.), 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 46 citations in OpenAlex.

  1. Trial
  2. Y-box binding proteins in immunity and RNA virus infection.Microbiology and molecular biology reviews : MMBR · 2025
    Review
  3. Article
  4. Review
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Review
  12. Article
  13. Review
  14. Review
  15. Y RNAs: Biogenesis, Function and Implications for the Cardiovascular System.Advances in experimental medicine and biology · 2020
    Review
  16. Ro60 and Y RNAs: structure, functions, and roles in autoimmunity.Critical reviews in biochemistry and molecular biology · 2019
    Review
  17. Structural Basis for tRNA Mimicry by a Bacterial Y RNA.Structure (London, England : 1993) · 2018
    Article
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Soyeong SimDepartment of Cell Biology, Yale University School of Medicine, New Haven, Connecticut 06536, USA.
Jie Yao
David E Weinberg
Sherry Niessen
John R Yates
Sandra L Wolin
Yale University · USScripps Research Institute · US

Funding

ZDS2P REGULATES SWE1P-DEPENDENT POLARIZED CELL GROWTH IN S CEREVISIAEP41RR011823 · NCRR · UNIVERSITY OF WASHINGTON · PI SALVESEN, GUY S. · 1996 to 2011
$24.7M
RNA quality control and environmental stressR01GM073863 · NIGMS · YALE UNIVERSITY · PI TSCHUDI, CHRISTIAN · 2005 to 2017
$3.6M
Biogenesis of Small RNAsR01GM048410 · NIGMS · YALE UNIVERSITY · PI WOLIN, SANDRA L. · 1998 to 2009
$2.2M
FUNCTION OF THE RO RIBONUCLEOPROTEINS AND THE LA PROTEINR29GM048410 · NIGMS · YALE UNIVERSITY · PI WOLIN, SANDRA L. · 1993 to 1997
–
NCRR NIH HHS P41 RR011823NIGMS NIH HHS GM048410NIGMS NIH HHS R01 GM048410NIGMS NIH HHS R01 GM073863
6 · The paper itself

Abstract

The Ro 60-kDa autoantigen, a ring-shaped RNA-binding protein, traffics between the nucleus and cytoplasm in vertebrate cells. In some vertebrate nuclei, Ro binds misfolded noncoding RNAs and may function in quality control. In the cytoplasm, Ro binds noncoding RNAs called Y RNAs. Y RNA binding blocks a nuclear accumulation signal, retaining Ro in the cytoplasm. Following UV irradiation, this signal becomes accessible, allowing Ro to accumulate in nuclei. To investigate how other cellular components influence the function and subcellular location of Ro, we identified several proteins that copurify with the mouse Ro protein. Here, we report that the zipcode-binding protein ZBP1 influences the subcellular localization of both Ro and the Y3 RNA. Binding of ZBP1 to the Ro/Y3 complex increases after UV irradiation and requires the Y3 RNA. Despite the lack of an identifiable CRM1-dependent export signal, nuclear export of Ro is sensitive to the CRM1 inhibitor leptomycin B. In agreement with a previous report, we find that ZBP1 export is partly dependent on CRM1. Both Ro and Y3 RNA accumulate in nuclei when ZBP1 is depleted. Our data indicate that ZBP1 may function as an adapter to export the Ro/Y3 RNA complex from nuclei.

Indexed as

Active Transport, Cell NucleusAnimalsAutoantigensCell LineCell NucleusExportin 1 ProteinFatty Acids, UnsaturatedGlycoproteinsKaryopherinsMiceReceptors, Cytoplasmic and NuclearRibonucleoproteinsRNA-Binding ProteinsRNA, Small CytoplasmicRNA, UntranslatedUltraviolet RaysAutoantigensExportin 1 ProteinFatty Acids, UnsaturatedGlycoproteinsKaryopherinsleptomycin BReceptors, Cytoplasmic and NuclearRibonucleoproteinsRNA-Binding ProteinsRNA, Small CytoplasmicRNA, UntranslatedSsa2 protein, mouseZbp1 protein, mouse

Identifiers

PMID22114317
PMCPMC3261732
OpenAlexW2125480408

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.