Evidence map›Paper›PMID 22113231›Full record

ArticleBiometals : an international journal on the role of metal ions in biology, biochemistry, and medicine2012

Regulation of zinc-responsive Slc39a5 (Zip5) translation is mediated by conserved elements in the 3'-untranslated region.

Benjamin P Weaver, Glen K Andrews

Open access · hybridAbstract read
In one paragraph

Article in Biometals : an international journal on the role of metal ions in biology, biochemistry, and medicine, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.1field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 31 citations in OpenAlex.

  1. Role of zinc in health and disease.Clinical and experimental medicine · 2024
    Review
  2. Article
  3. Review
  4. Article
  5. Article
  6. Review
  7. Altered zinc balance in the Atp7bMetallomics : integrated biometal science · 2018
    Article
  8. Zinc Transporter Proteins.Neurochemical research · 2018
    Review
  9. Review
  10. Article
  11. Review
  12. Article
  13. Review
  14. Article
  15. Article
  16. Zinc transporters and their role in the pancreatic β-cell.Journal of diabetes investigation · 2012
    Review
  17. Article
  18. Article
  19. The SLC39 family of zinc transporters.Molecular aspects of medicine
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

Benjamin P WeaverDepartment of Biochemistry and Molecular Biology, University of Kansas Medical Center, Kansas City, KS 66160-7421, USA. Benjamin.Weaver@Colorado.edu
Glen K Andrews
University of Colorado System · USUniversity of Kansas Medical Center · US

Funding

A Mouse Model of Acrodermatitis EnteropathicaR01DK063975 · NIDDK · UNIVERSITY OF KANSAS MEDICAL CENTER · PI ANDREWS, GLEN K · 2003 to 2012
$3.1M
NIDDK NIH HHS DK63975NIDDK NIH HHS DK63975-8S1NIDDK NIH HHS R01 DK063975
6 · The paper itself

Abstract

Translation of the basolateral zinc transporter ZIP5 is repressed during zinc deficiency but Zip5 mRNA remains associated with polysomes and can be rapidly translated when zinc is repleted. Herein, we examined the mechanisms regulating translation of Zip5. The 3'-untranslated region (UTR) of Zip5 mRNA is well conserved among mammals and is predicted by mFOLD to form a very stable stem-loop structure. Three algorithms predict this structure to be flanked by repeated seed sites for miR-328 and miR-193a. RNAse footprinting supports the notion that a stable stem-loop structure exists in this 3'-UTR and electrophoretic mobility shift assays detect polysomal protein(s) binding specifically to the stem-loop structure in the Zip5 3'-UTR. miR-328 and miR-193a are expressed in tissues known to regulate Zip5 mRNA translation in response to zinc availability and both are polysome-associated consistent with Zip5 mRNA localization. Transient transfection assays using native and mutant Zip5 3'-UTRs cloned 3' to luciferase cDNA revealed that the miRNA seed sites and the stem-loop function together to augment translation of Zip5 mRNA when zinc is replete.

Indexed as

Protein Biosynthesis3' Untranslated RegionsAnimalsBase SequenceCation Transport ProteinsCells, CulturedMiceMicroRNAsMolecular Sequence DataPolyribosomesRatsRibonucleoproteins3' Untranslated RegionsCation Transport ProteinsMicroRNAsRibonucleoproteinsSlc39a5 protein, mouse

Identifiers

PMID22113231
PMCPMC3299966
OpenAlexW2005910325

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.