Evidence map›Paper›PMID 22110748›Full record

ArticlePloS one2011

Ectopic expression reveals a conserved PHYB homolog in soybean.

Fa-Qiang Wu, Xiao-Mei Zhang, Dong-Mei Li, Yong-Fu Fu

Abstract read
In one paragraph

Article in PloS one, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Genomic and Transcriptomic Analysis of Pea (Plants (Basel, Switzerland) · 2023
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  7. Highly multiplexed AmpliSeq technology identifies novel variation of flowering time-related genes in soybean (Glycine max).DNA research : an international journal for rapid publication of reports on genes and genomes · 2019
    Article
  8. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Fa-Qiang WuInstitute of Crop Sciences, National Key Facility of Crop Gene Resource and Genetic Improvement, Chinese Academy of Agricultural Sciences, Haidian District, Beijing, China.
Xiao-Mei Zhang
Dong-Mei Li
Yong-Fu Fu

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Phytochromes sense red/far-red light and trigger a cascade of physiological responses in plant. Here, a phytochrome B homolog, GmPHYB1, was amplified from the soybean genome, and its expression profiles were obtained for various parts of the plant and at various developmental stages. The gene was ectopically expressed in Arabidopsis thaliana, driven by CaMV 35S promoter, to study the physiological functions of the gene product. The overexpressors of GmPHYB1 behaved similarly to those of AtPHYB, but with some subtle differences with respect to the acceleration of flowering under short day conditions and the growth of the hypocotyl under certain light fluence rate. The results suggested that this soybean PHYB homolog was well conserved both at the level of sequence and physiological function.

Indexed as

Sequence Homology, Nucleic AcidArabidopsisConserved SequenceDown-RegulationEcotypeEvolution, MolecularFlowersGene ExpressionGene Expression Regulation, PlantGenome, PlantGlycine maxHypocotylLightPhytochrome APhytochrome BPlant RootsPhytochrome APhytochrome B

Identifiers

PMID22110748
PMCPMC3218029

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.