Evidence map›Paper›PMID 22110134›Full record

ArticleThe Journal of biological chemistry2012

Origin of initial burst in activity for Trichoderma reesei endo-glucanases hydrolyzing insoluble cellulose.

Leigh Murphy, Nicolaj Cruys-Bagger, Heidi Delcomyn Damgaard, Martin J Baumann, Søren Nymand Olsen, Kim Borch, Søren Flensted Lassen, Matt Sweeney, Hirosuke Tatsumi, Peter Westh

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Activity of fungal β-glucosidases on cellulose.Biotechnology for biofuels · 2020
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Endo-exo synergism in cellulose hydrolysis revisited.The Journal of biological chemistry · 2012
    Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Leigh MurphyRoskilde University, NSM, Biomaterials, 1 Universitetsvej, DK-4000 Roskilde, Denmark.
Nicolaj Cruys-Bagger
Heidi Delcomyn Damgaard
Martin J Baumann
Søren Nymand Olsen
Kim Borch
Søren Flensted Lassen
Matt Sweeney
Hirosuke Tatsumi
Peter Westh

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The kinetics of cellulose hydrolysis have long been described by an initial fast hydrolysis rate, tapering rapidly off, leading to a process that takes days rather than hours to complete. This behavior has been mainly attributed to the action of cellobiohydrolases and often linked to the processive mechanism of this exo-acting group of enzymes. The initial kinetics of endo-glucanases (EGs) is far less investigated, partly due to a limited availability of quantitative assay technologies. We have used isothermal calorimetry to monitor the early time course of the hydrolysis of insoluble cellulose by the three main EGs from Trichoderma reesei (Tr): TrCel7B (formerly EG I), TrCel5A (EG II), and TrCel12A (EG III). These endo-glucanases show a distinctive initial burst with a maximal rate that is about 5-fold higher than the rate after 5 min of hydrolysis. The burst is particularly conspicuous for TrCel7B, which reaches a maximal turnover of about 20 s(-1) at 30 °C and conducts about 1200 catalytic cycles per enzyme molecule in the initial fast phase. For TrCel5A and TrCel12A the extent of the burst is 2-300 cycles per enzyme molecule. The availability of continuous data on EG activity allows an analysis of the mechanisms underlying the initial kinetics, and it is suggested that the slowdown is linked to transient inactivation of enzyme on the cellulose surface. We propose, therefore, that the frequency of structures on the substrate surface that cause transient inactivation determine the extent of the burst phase.

Indexed as

CellulaseCelluloseFungal ProteinsHydrolysisSolubilityTrichodermaCellulaseCelluloseFungal Proteins

Identifiers

PMID22110134
PMCPMC3256860

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.