ArticleNucleic acids research2012
PDBe: Protein Data Bank in Europe.
Article in Nucleic acids research, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
51 citing papers in PubMed.
- scEnhancer: a single-cell enhancer resource with annotation across hundreds of tissue/cell types in three species.Nucleic acids research · 2022Article
- ONQUADRO: a database of experimentally determined quadruplex structures.Nucleic acids research · 2022Article
- Structural Prediction of Peptide-MHC Binding Modes.Methods in molecular biology (Clifton, N.J.) · 2022Review
- Online biophysical predictions for SARS-CoV-2 proteins.BMC molecular and cell biology · 2021Article
- Article
- EnhancerAtlas 2.0: an updated resource with enhancer annotation in 586 tissue/cell types across nine species.Nucleic acids research · 2020Article
- PDBe: towards reusable data delivery infrastructure at protein data bank in Europe.Nucleic acids research · 2018Article
- Article
- MANORAA (Mapping Analogous Nuclei Onto Residue And Affinity) for identifying protein-ligand fragment interaction, pathways and SNPs.Nucleic acids research · 2016Article
- PDBe: improved accessibility of macromolecular structure data from PDB and EMDB.Nucleic acids research · 2016Article
- DisCons: a novel tool to quantify and classify evolutionary conservation of intrinsic protein disorder.BMC bioinformatics · 2015Article
- The RCSB PDB "Molecule of the Month": Inspiring a Molecular View of Biology.PLoS biology · 2015Article
- A 3D cellular context for the macromolecular world.Nature structural & molecular biology · 2014Article
- Structures and binding specificity of galactose- and mannose-binding lectins from champedak: differences from jackfruit lectins.Acta crystallographica. Section F, Structural biology communications · 2014Article
- An overview of tools for the validation of protein NMR structures.Journal of biomolecular NMR · 2014Review
- PDBe: Protein Data Bank in Europe.Nucleic acids research · 2014Article
- Evolution of CRISPR RNA recognition and processing by Cas6 endonucleases.Nucleic acids research · 2014Article
- MP:PD--a data base of internal packing densities, internal packing defects and internal waters of helical membrane proteins.Nucleic acids research · 2014Article
- EKPD: a hierarchical database of eukaryotic protein kinases and protein phosphatases.Nucleic acids research · 2014Article
- FireDB: a compendium of biological and pharmacologically relevant ligands.Nucleic acids research · 2014Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
32 authors.
Funding
Abstract
The Protein Data Bank in Europe (PDBe; pdbe.org) is a partner in the Worldwide PDB organization (wwPDB; wwpdb.org) and as such actively involved in managing the single global archive of biomacromolecular structure data, the PDB. In addition, PDBe develops tools, services and resources to make structure-related data more accessible to the biomedical community. Here we describe recently developed, extended or improved services, including an animated structure-presentation widget (PDBportfolio), a widget to graphically display the coverage of any UniProt sequence in the PDB (UniPDB), chemistry- and taxonomy-based PDB-archive browsers (PDBeXplore), and a tool for interactive visualization of NMR structures, corresponding experimental data as well as validation and analysis results (Vivaldi).
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.