Evidence map›Paper›PMID 22108903›Full record

ArticleInternational journal of colorectal disease2012

The haplotypes of TNFRSF17 polymorphisms are associated with colon cancer in a Korean population.

Soo-Cheon Chae, Ji-In Yu, Tai-Boong Uhm, Sam-Yun Lee, Dong-Baek Kang, Jeong-Kyun Lee, Won-Cheol Park, Ki-Jung Yun

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Article in International journal of colorectal disease, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact, top 91% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 36 citations in OpenAlex.

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4 · The record

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5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Soo-Cheon ChaeDepartment of Pathology, School of Medicine, Wonkwang University, Iksan, Chonbuk, 570-749, Republic of Korea.
Ji-In Yu
Tai-Boong Uhm
Sam-Yun Lee
Dong-Baek Kang
Jeong-Kyun Lee
Won-Cheol Park
Ki-Jung Yun
Wonkwang University · KRJeonbuk National University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeWe previously found that the haplotypes of TNFRSF17 single nucleotide polymorphisms (SNPs) were associated with the susceptibility to inflammatory bowel disease on Korean population. The present study aimed to investigate whether the polymorphisms in the TNFRSF17 gene are associated with susceptibility to colorectal cancer (CRC).

methodsGenotype analysis in the TNFRSF17 SNPs was performed by high-resolution melting and TaqMan probe analysis, and the genotype and allele frequencies of TNFRSF17 SNPs were compared between the CRC patients and the healthy controls. The haplotype frequencies of TNFRSF17 for multiple loci were estimated using the expectation maximization algorithm.

resultsAlthough, the genotype and allelic frequencies of these SNPs, in the colon cancer and rectal cancer patients, were not significantly different from those in the healthy controls, the genotype and allele frequency of g.2493G>A was significantly different between the healthy controls and the right colon cancer patients (P = 0.014 and 0.004, respectively). Moreover, the haplotypes frequencies in the healthy controls were significantly different from those in the colon cancer patients.

conclusionOur results suggest that TNFRSF17 may be a candidate gene associated with the pathogenesis of colon cancer, and the haplotypes of the TNFRSF17 polymorphisms might be one of the markers for colon cancer susceptibility.

Indexed as

Genetic Association StudiesGenetic Predisposition to DiseaseAdultAllelesAsian PeopleB-Cell Maturation AntigenCase-Control StudiesColonic NeoplasmsFemaleGene FrequencyGenetics, PopulationHaplotypesHumansMaleMiddle AgedPolymorphism, Single NucleotideB-Cell Maturation AntigenTNFRSF17 protein, human

Identifiers

PMID22108903
OpenAlexW1967301902

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.