Evidence map›Paper›PMID 22105996›Full record

Trial reportJournal of immunology (Baltimore, Md. : 1950)2012

Altered B cell homeostasis is associated with type I diabetes and carriers of the PTPN22 allelic variant.

Tania Habib, Andrew Funk, Mary Rieck, Archana Brahmandam, Xuezhi Dai, Anil K Panigrahi, Eline T Luning Prak, Almut Meyer-Bahlburg, Srinath Sanda, Carla Greenbaum and 2 more

Open access · bronzeAbstract readClinical TrialMulticenter Study
In one paragraph

Trial report in Journal of immunology (Baltimore, Md. : 1950), 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 77 papers.

0numbers the graph read from it
0cells of the map it votes in
77citing papers in PubMed
7.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

77 citing papers in PubMed, 119 citations in OpenAlex.

  1. Altered B cell metabolic pathways characterize type 1 diabetes progression.Journal of immunology (Baltimore, Md. : 1950) · 2026
    Article
  2. Review
  3. Review
  4. Article
  5. Article
  6. Article
  7. Clinical and experimental treatment of type 1 diabetes.Clinical and experimental immunology · 2022
    Review
  8. Genetic Polymorphism ofMedicina (Kaunas, Lithuania) · 2022
    Review
  9. B Cell Aberrance in Lupus: the Ringleader and the Solution.Clinical reviews in allergy & immunology · 2022
    Review
  10. Review
  11. Article
  12. Immunogenetics of Lupus Erythematosus.Advances in experimental medicine and biology · 2022
    Article
  13. Association of the single nucleotide polymorphism C1858T of theInternational journal of reproductive biomedicine · 2021
    Article
  14. Overexpression of theJournal of immunology (Baltimore, Md. : 1950) · 2021
    Article
  15. Review
  16. Influence ofFrontiers in immunology · 2021
    Review
  17. Article
  18. Observational
  19. Regulatory B Cells: Role in Type 1 Diabetes.Frontiers in immunology · 2021
    Review
  20. Endotypes in T1D: B lymphocytes and early onset.Current opinion in endocrinology, diabetes, and obesity · 2020
    Review

17 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 1 country.

Tania HabibTranslational Research Program, Benaroya Research Institute, Seattle, WA 98101, USA.
Andrew Funk
Mary Rieck
Archana Brahmandam
Xuezhi Dai
Anil K Panigrahi
Eline T Luning Prak
Almut Meyer-Bahlburg
Srinath Sanda
Carla Greenbaum
David J Rawlings
Jane H Buckner
Benaroya Research InstituteUniversity of Pennsylvania · USSeattle Institute for Biomedical and Clinical Research · USUniversity of Washington · US

Funding

Vector and Transgenic Mouse CoreP30DK017047 · NIDDK · UNIVERSITY OF WASHINGTON · PI Sakeneh Zraika · 1986 to 2026
$41.4M
Immune correlates of steroid responsiveness in ITPR56AI090842 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI LUNING PRAK, ELINE TJETSKE · 2010 to 2010
$404k
NIAID NIH HHS R56 AI090842NIAID NIH HHS R56-AI-090842NIDDK NIH HHS P30 DK017047
6 · The paper itself

Abstract

The PTPN22 genetic variant 1858T, encoding Lyp620W, is associated with multiple autoimmune disorders for which the production of autoantibodies is a common feature, suggesting a loss of B cell tolerance. Lyp620W results in blunted BCR signaling in memory B cells. Because BCR signal strength is tightly coupled to central and peripheral tolerance, we examined whether Lyp620W impacts peripheral B cell homeostasis in healthy individuals heterozygous for the PTPN221858T variant. We found that these subjects display alterations in the composition of the B cell pool that include specific expansion of the transitional and anergic IgD(+)IgM(-)CD27(-) B cell subsets. The PTPN22 1858T variant was further associated with significantly diminished BCR signaling and a resistance to apoptosis in both transitional and naive B cells. Strikingly, parallel changes in both BCR signaling and composition of B cell compartment were observed in type 1 diabetic subjects, irrespective of PTPN22 genotype, revealing a novel immune phenotype and likely shared mechanisms leading to a loss of B cell tolerance. Our combined findings suggest that Lyp620W-mediated effects, due in part to the altered BCR signaling threshold, contribute to breakdown of peripheral tolerance and the entry of autoreactive B cells into the naive B cell compartment.

Indexed as

AllelesDiabetes Mellitus, Type 1Protein Tyrosine Phosphatase, Non-Receptor Type 22Signal TransductionAutoantibodiesB-Lymphocyte SubsetsClonal AnergyFemaleGenotypeHomeostasisHumansImmune ToleranceMaleReceptors, Antigen, B-CellAutoantibodiesProtein Tyrosine Phosphatase, Non-Receptor Type 22PTPN22 protein, humanReceptors, Antigen, B-Cell

Identifiers

PMID22105996
PMCPMC3670766
OpenAlexW2128296731

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.