Evidence map›Paper›PMID 22104965›Full record

ReviewCurrent opinion in structural biology2012

How, when and why proteins collapse: the relation to folding.

Gilad Haran

Abstract readReview
In one paragraph

Review in Current opinion in structural biology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 59 papers.

0numbers the graph read from it
0cells of the map it votes in
59citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

59 citing papers in PubMed.

  1. Interlayer rotation (twisting) switches interlayer mobility in moiré superlattices.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  2. Article
  3. Article
  4. Article
  5. Article
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  9. Article
  10. The Protein Unfolded State: One, No One and One Hundred Thousand.Journal of the American Chemical Society · 2022
    Review
  11. Article
  12. Article
  13. Saturation Mutagenesis of the Transmembrane Region of HokC inInternational journal of molecular sciences · 2021
    Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Dramatic Shape Changes Occur as CytochromeThe journal of physical chemistry. B · 2020
    Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author.

Gilad HaranChemical Physics Department, Weizmann Institute of Science, Rehovot 76100, Israel.

Funding

Single-molecule fluorescence studies of protein foldingR01GM080515 · NIGMS · WEIZMANN INSTITUTE OF SCIENCE · PI HARAN, GILAD · 2007 to 2010
$992k
NIGMS NIH HHS R01 GM080515NIGMS NIH HHS R01GM080515
6 · The paper itself

Abstract

Unfolded proteins under strongly denaturing conditions are highly expanded. However, when the conditions are more close to native, an unfolded protein may collapse to a compact globular structure distinct from the folded state. This transition is akin to the coil-globule transition of homopolymers. Single-molecule FRET experiments have been particularly conducive in revealing the collapsed state under conditions of coexistence with the folded state. The collapse can be even more readily observed in natively unfolded proteins. Time-resolved studies, using FRET and small-angle scattering, have shown that the collapse transition is a very fast event, probably occurring on the submicrosecond time scale. The forces driving collapse are likely to involve both hydrophobic and backbone interactions. The loss of configurational entropy during collapse makes the unfolded state less stable compared to the folded state, thus facilitating folding.

Indexed as

Protein FoldingFluorescence Resonance Energy TransferHumansHydrophobic and Hydrophilic InteractionsKineticsProteinsProteins

Identifiers

PMID22104965
PMCPMC3288525

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.