Evidence map›Paper›PMID 22103764›Full record

ArticleAnalytical chemistry2012

Evaluating different fixation protocols for spectral cytopathology, part 1.

Antonella I Mazur, Ellen J Marcsisin, Benjamin Bird, Miloš Miljković, Max Diem

Abstract readEvaluation Study
In one paragraph

Article in Analytical chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
4.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 36 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Antonella I MazurDepartment of Chemistry & Chemical Biology, Northeastern University, 360 Huntington Avenue, Boston, Massachusetts, USA. Antonella.Mazur@gmail.com
Ellen J Marcsisin
Benjamin Bird
Miloš Miljković
Max Diem
Northeastern University · US

Funding

Micro-Spectroscopy for Cytological Screening, and Staging of DiseaseR01CA090346 · NCI · NORTHEASTERN UNIVERSITY · PI DIEM, MAX · 2003 to 2010
$3.2M
Oral Cancer Screening via Spectral CytopathologyR21CA153148 · NCI · NORTHEASTERN UNIVERSITY · PI DIEM, MAX · 2010 to 2011
$367k
NCI NIH HHS CA 090346NCI NIH HHS CA 153148NCI NIH HHS R01 CA090346NCI NIH HHS R21 CA153148
6 · The paper itself

Abstract

Spectral cytopathology (SCP) is a novel approach for disease diagnosis that utilizes infrared spectroscopy to interrogate the biochemical components of cellular samples and multivariate statistical methods, such as principal component analysis, to analyze and diagnose spectra. SCP has taken vast strides in its application for disease diagnosis over the past decade; however, fixation-induced changes and sample handling methods are still not systematically understood. Conversely, fixation and staining methods in conventional cytopathology, typically involving protocols to maintain the morphology of cells, have been documented and widely accepted for nearly a century. For SCP, fixation procedures must preserve the biochemical composition of samples so that spectral changes significant to disease diagnosis are not masked. We report efforts to study the effects of fixation protocols commonly used in traditional cytopathology and SCP, including fixed and unfixed methods applied to exfoliated oral (buccal) mucosa cells. Data suggest that the length of time in fixative and duration of sample storage via desiccation contribute to minor spectral changes where spectra are nearly superimposable. These findings illustrate that changes influenced by fixation are negligible in comparison to changes induced by disease.

Indexed as

Tissue FixationCalcium PhosphatesHumansMouth DiseasesMouth MucosaPrincipal Component AnalysisTime Factorscalcium phosphateCalcium Phosphates

Identifiers

PMID22103764
PMCPMC3277680
OpenAlexW1986846505

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.