Evidence map›Paper›PMID 22103394›Full record

ArticleJournal of proteome research2012

Proteomic and biochemical evidence support a role for transport vesicles and endosomes in stress response and secondary metabolism in Aspergillus parasiticus.

John E Linz, Anindya Chanda, Sung-Yong Hong, Douglas A Whitten, Curtis Wilkerson, Ludmila V Roze

Abstract read
In one paragraph

Article in Journal of proteome research, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
5.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 36 citations in OpenAlex.

  1. Review
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  3. Frontiers in microbiology · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

John E LinzDepartment of Food Science and Human Nutrition, Department of Microbiology and Molecular Genetics, 234B GM Trout Building, Michigan State University , East Lansing, Michigan 48824, United States. jlinz@msu.edu
Anindya Chanda
Sung-Yong Hong
Douglas A Whitten
Curtis Wilkerson
Ludmila V Roze
Michigan State University · USHarvard University · US

Funding

Elimination of dietary aflatoxin to prevent liver cancerR01CA052003 · NCI · MICHIGAN STATE UNIVERSITY · PI LINZ, JOHN E · 1991 to 2012
$2.5M
NCI NIH HHS R01 CA052003NCI NIH HHS R01CA52003-20
6 · The paper itself

Abstract

Aflatoxin is among the most potent naturally occurring carcinogens known. Previous studies demonstrated that endosomes in the filamentous fungus Aspergillus parasiticus carry enzymes that catalyze the final two steps in aflatoxin synthesis, and these structures also play a role in aflatoxin storage and export. We hypothesized that endosomes house a complete and functional aflatoxin biosynthetic pathway. To address this hypothesis, we purified a cellular fraction containing endosomes, transport vesicles, and vacuoles (V fraction) from A. parasiticus grown under aflatoxin inducing and noninducing conditions. We also added (fed) aflatoxin pathway intermediates to V fraction to test the functional status of aflatoxin pathway enzymes. High throughput LC-MS/MS analysis of proteins in V fraction detected 8 aflatoxin enzymes with high reliability and 8 additional enzymes at lower reliability, suggesting that most aflatoxin pathway enzymes are present. Purified V fraction synthesized aflatoxin and addition of the pathway intermediate versicolorin A increased aflatoxin synthesis, confirming that middle and late aflatoxin enzymes in V fraction are functional. Of particular significance, proteomic and biochemical analysis strongly suggested that additional secondary metabolic pathways as well as proteins involved in response to heat, osmotic, and oxidative stress are housed in V fraction.

Indexed as

AflatoxinsAspergillusBacterial ProteinsChromatography, LiquidCulture MediaEndosomesMetabolic Networks and PathwaysProteomeStress, PhysiologicalTandem Mass SpectrometryTransport VesiclesVacuolesAflatoxinsBacterial ProteinsCulture MediaProteome

Identifiers

PMID22103394
PMCPMC3272149
OpenAlexW2015007186

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.