Evidence map›Paper›PMID 22102866›Full record

ArticlePloS one2011

GNC and CGA1 modulate chlorophyll biosynthesis and glutamate synthase (GLU1/Fd-GOGAT) expression in Arabidopsis.

Darryl Hudson, David Guevara, Mahmoud W Yaish, Carol Hannam, Nykoll Long, Joseph D Clarke, Yong-Mei Bi, Steven J Rothstein

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 82 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
82citing papers in PubMed, 1 pooled it
9.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

82 citing papers in PubMed, 1 synthesis or guideline pooled it, 161 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Regulation of chloroplast biogenesis and differentiation.Journal of experimental botany · 2026
    Review
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Ubiquitin LigaseInternational journal of molecular sciences · 2024
    Article
  14. Article
  15. Article
  16. The Putative GATA Transcription FactorLife (Basel, Switzerland) · 2024
    Article
  17. Dual RNA-seq of maize andFrontiers in plant science · 2024
    Article
  18. The Genetic Dissection of Nitrogen Use-Related Traits in Flax (International journal of molecular sciences · 2023
    Article
  19. Review
  20. Genome-Wide Identification ofInternational journal of molecular sciences · 2023
    Article

22 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Darryl HudsonDepartment of Molecular and Cellular Biology, University of Guelph, Guelph, Ontario, Canada.
David Guevara
Mahmoud W Yaish
Carol Hannam
Nykoll Long
Joseph D Clarke
Yong-Mei Bi
Steven J Rothstein
University of Guelph · CASyngenta (United States) · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chloroplast development is an important determinant of plant productivity and is controlled by environmental factors including amounts of light and nitrogen as well as internal phytohormones including cytokinins and gibberellins (GA). The paralog GATA transcription factors GNC and CGA1/GNL up-regulated by light, nitrogen and cytokinin while also being repressed by GA signaling. Modifying the expression of these genes has previously been shown to influence chlorophyll content in Arabidopsis while also altering aspects of germination, elongation growth and flowering time. In this work, we also use transgenic lines to demonstrate that GNC and CGA1 exhibit a partially redundant control over chlorophyll biosynthesis. We provide novel evidence that GNC and CGA1 influence both chloroplast number and leaf starch in proportion to their transcript level. GNC and CGA1 were found to modify the expression of chloroplast localized GLUTAMATE SYNTHASE (GLU1/Fd-GOGAT), which is the primary factor controlling nitrogen assimilation in green tissue. Altering GNC and CGA1 expression was also found to modulate the expression of important chlorophyll biosynthesis genes (GUN4, HEMA1, PORB, and PORC). As previously demonstrated, the CGA1 transgenic plants demonstrated significantly altered timing to a number of developmental events including germination, leaf production, flowering time and senescence. In contrast, the GNC transgenic lines we analyzed maintain relatively normal growth phenotypes outside of differences in chloroplast development. Despite some evidence for partial divergence, results indicate that regulation of both GNC and CGA1 by light, nitrogen, cytokinin, and GA acts to modulate nitrogen assimilation, chloroplast development and starch production. Understanding the mechanisms controlling these processes is important for agricultural biotechnology.

Indexed as

Amino Acid OxidoreductasesArabidopsisArabidopsis ProteinsChlorophyllChloroplastsChromatin ImmunoprecipitationCytokininsGATA Transcription FactorsGene Expression Regulation, PlantGibberellinsNitrogenPlant LeavesPlants, Genetically ModifiedReal-Time Polymerase Chain ReactionRNA, MessengerRNA, PlantAmino Acid OxidoreductasesArabidopsis ProteinsChlorophyllCytokininsGATA Transcription FactorsGibberellinsglutamate synthase (ferredoxin)NitrogenRNA, MessengerRNA, PlantStarch

Identifiers

PMID22102866
PMCPMC3213100
OpenAlexW2151420355

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.