Evidence map›Paper›PMID 22102724›Full record

ArticleJournal of immunology (Baltimore, Md. : 1950)2011

Interaction of streptavidin-based peptide-MHC oligomers (tetramers) with cell-surface TCRs.

Jennifer D Stone, Maxim N Artyomov, Adam S Chervin, Arup K Chakraborty, Herman N Eisen, David M Kranz

Open access · bronzeAbstract read
In one paragraph

Article in Journal of immunology (Baltimore, Md. : 1950), 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
  2. Article
  3. Strategies and rules for tuning TCR-derived therapy.Expert reviews in molecular medicine · 2023
    Review
  4. Article
  5. Article
  6. Article
  7. How the avidity of polymerase binding to the -35/-10 promoter sites affects gene expression.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. T Cell Receptor Engineering and Analysis Using the Yeast Display Platform.Methods in molecular biology (Clifton, N.J.) · 2015
    Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Jennifer D StoneDepartment of Biochemistry, University of Illinois, Urbana-Champaign, Urbana, IL 61801, USA. jstone@illinois.edu
Maxim N Artyomov
Adam S Chervin
Arup K Chakraborty
Herman N Eisen
David M Kranz
University of Illinois Urbana-Champaign · USRagon Institute of MGH, MIT and Harvard · USMassachusetts Institute of Technology · US

Funding

Protein Expression and Peptide CoreP01CA097296 · NCI · UNIVERSITY OF CHICAGO · PI MEREDITH, STEPHEN C. · 2003 to 2012
$15.0M
Visualizing, Quantifying, and Modeling of T Cell Response to Listeria InfectionP01AI071195 · NIAID · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI DUSTIN, MICHAEL LORAN · 2006 to 2010
$8.1M
NIH Director's Pioneer AwardDP1OD001022 · OD · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI CHAKRABORTY, ARUP K. · 2006 to 2010
$4.1M
Structure, Function &Engineering of Tau Cell ReceptorsR01GM055767 · NIGMS · UNIVERSITY OF ILLINOIS URBANA-CHAMPAIGN · PI KRANZ, DAVID M. · 1997 to 2009
$2.4M
NCI NIH HHS P01 CA097296NIAID NIH HHS P01 AI071195NIAID NIH HHS P01-AI071195NIGMS NIH HHS R01 GM055767NIGMS NIH HHS R01 GM55767NIH HHS DP1 OD001022
6 · The paper itself

Abstract

The binding of oligomeric peptide-MHC (pMHC) complexes to cell surface TCR can be considered to approximate TCR-pMHC interactions at cell-cell interfaces. In this study, we analyzed the equilibrium binding of streptavidin-based pMHC oligomers (tetramers) and their dissociation kinetics from CD8(pos) T cells from 2C-TCR transgenic mice and from T cell hybridomas that expressed the 2C TCR or a high-affinity mutant (m33) of this TCR. Our results show that the tetramers did not come close to saturating cell-surface TCR (binding only 10-30% of cell-surface receptors), as is generally assumed in deriving affinity values (K(D)), in part because of dissociative losses from tetramer-stained cells. Guided by a kinetic model, the oligomer dissociation rate and equilibrium constants were seen to depend not only on monovalent association and dissociation rates (k(off) and k(on)), but also on a multivalent association rate (μ) and TCR cell-surface density. Our results suggest that dissociation rates could account for the recently described surprisingly high frequency of tetramer-negative, functionally competent T cells in some T cell responses.

Indexed as

Models, ImmunologicalAnimalsHybridomasMajor Histocompatibility ComplexMembrane ProteinsMiceMice, Inbred C57BLMice, KnockoutMice, TransgenicMultiprotein ComplexesPeptidesProtein BindingReceptors, Antigen, T-Cell, alpha-betaSingle-Chain AntibodiesStreptavidinMembrane ProteinsMultiprotein ComplexesPeptidesReceptors, Antigen, T-Cell, alpha-betaSingle-Chain AntibodiesStreptavidin

Identifiers

PMID22102724
PMCPMC3237744
OpenAlexW2148596794

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.