Evidence map›Paper›PMID 22101826›Full record

ArticleActa crystallographica. Section D, Biological crystallography2011

Human Suv3 protein reveals unique features among SF2 helicases.

Robert Jedrzejczak, Jiawei Wang, Miroslawa Dauter, Roman J Szczesny, Piotr P Stepien, Zbigniew Dauter

Open access · bronzeAbstract read
In one paragraph

Article in Acta crystallographica. Section D, Biological crystallography, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. SUV3 Helicase and Mitochondrial Homeostasis.International journal of molecular sciences · 2023
    Review
  3. Article
  4. Review
  5. Article
  6. RNA helicases in RNA decay.Biochemical Society transactions · 2018
    Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 5 institutions in 3 countries.

Robert JedrzejczakSynchrotron Radiation Research Section, National Cancer Institute, Argonne National Laboratory, Argonne, IL 60439, USA.
Jiawei Wang
Miroslawa Dauter
Roman J Szczesny
Piotr P Stepien
Zbigniew Dauter
National Cancer Institute · USArgonne National Laboratory · USInstitute of Biochemistry and Biophysics, Polish Academy of Sciences · PLTsinghua University · CNUniversity of Warsaw · PL

Funding

Midwest Center for Structural GenomicsU54GM094585 · NIGMS · UNIVERSITY OF CHICAGO · PI MINOR, WLADEK · 2010 to 2014
$33.7M
Macromolecular Crystallography Research with Synchrotron RadiationZIABC010378 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI DAUTER, ZBIGNIEW · 2009 to 2020
$18.8M
CCR NIH HHS HHSN261200800001CIntramural NIH HHSNCI NIH HHS HHSN261200800001ENIGMS NIH HHS U54 GM094585PHS HHS HHSN261200800001
6 · The paper itself

Abstract

Suv3 is a helicase that is involved in efficient turnover and surveillance of RNA in eukaryotes. In vitro studies show that human Suv3 (hSuv3) in complex with human polynucleotide phosphorylase has RNA degradosome activity. The enzyme is mainly localized in mitochondria, but small fractions are found in cell nuclei. Here, two X-ray crystallographic structures of human Suv3 in complex with AMPPNP, a nonhydrolysable analog of ATP, and with a short five-nucleotide strand of RNA are presented at resolutions of 2.08 and 2.9 Å, respectively. The structure of the enzyme is very similar in the two complexes and consists of four domains. Two RecA-like domains form the tandem typical of all helicases from the SF2 superfamily which together with the C-terminal all-helical domain makes a ring structure through which the nucleotide strand threads. The mostly helical N-terminal domain is positioned externally with respect to the core of the enzyme. Most of the typical helicase motifs are present in hSuv3, but the protein shows certain unique characteristics, suggesting that Suv3 enzymes may constitute a separate subfamily of helicases.

Indexed as

RNA SplicingAdenylyl ImidodiphosphateAmino Acid MotifsCrystallizationDEAD-box RNA HelicasesEndoribonucleasesHumansIn Vitro TechniquesMitochondriaMultienzyme ComplexesNuclear ProteinsPolyribonucleotide NucleotidyltransferaseProtein BindingProtein ConformationProtein Structure, TertiaryRNAAdenylyl ImidodiphosphateDEAD-box RNA HelicasesdegradosomeEndoribonucleasesMultienzyme ComplexesNuclear ProteinsPolyribonucleotide NucleotidyltransferaseRNARNA-Binding ProteinsRNA HelicasesSerine-Arginine Splicing FactorsSUPV3L1 protein, human

Identifiers

PMID22101826
PMCPMC3211972
OpenAlexW2092393791

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.