Evidence map›Paper›PMID 22101730›Full record

ArticleNature immunology2011

AHR drives the development of gut ILC22 cells and postnatal lymphoid tissues via pathways dependent on and independent of Notch.

Jacob S Lee, Marina Cella, Keely G McDonald, Cecilia Garlanda, Gregory D Kennedy, Manabu Nukaya, Alberto Mantovani, Raphael Kopan, Christopher A Bradfield, Rodney D Newberry and 1 more

Open access · greenAbstract read
In one paragraph

Article in Nature immunology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 468 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
468citing papers in PubMed, 1 pooled it
18.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

468 citing papers in PubMed, 1 synthesis or guideline pooled it, 758 citations in OpenAlex.

  1. Influence of Alcohol on the Intestinal Immune System.Alcohol research : current reviews · 2025
    Pooled it
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408 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Jacob S LeeDepartment of Pathology and Immunology, Washington University School of Medicine, St. Louis, Missouri, USA.
Marina Cella
Keely G McDonald
Cecilia Garlanda
Gregory D Kennedy
Manabu Nukaya
Alberto Mantovani
Raphael Kopan
Christopher A Bradfield
Rodney D Newberry
Marco Colonna
Washington University in St. Louis · USUniversity of Wisconsin–Madison · US

Funding

Washington University DDRCC Supplemental Equipment RequestP30DK052574 · NIDDK · WASHINGTON UNIVERSITY · PI Nicholas O. Davidson · 2000 to 2026
$30.8M
WU P&FP30DK020579 · NIDDK · WASHINGTON UNIVERSITY · PI Irfan J Lodhi · 2013 to 2026
$27.1M
BIOCHEMICAL AND GENETIC ANALYSIS OF NOTCH SIGNALINGR01GM055479 · NIGMS · WASHINGTON UNIVERSITY · PI KOPAN, RAPHAEL, WEIRAUCH, MATTHEW TYSON · 1996 to 2021
$6.4M
Lymphotoxin Beta Receptor in Intestinal InflammationR01DK064798 · NIDDK · WASHINGTON UNIVERSITY · PI NEWBERRY, RODNEY D · 2005 to 2013
$2.8M
THE ROLE OF NK-22 CELLS IN ANTI-HIV-1 MUCOSAL IMMUNITYR01DE021255 · NIDCR · WASHINGTON UNIVERSITY · PI COLONNA, MARCO · 2010 to 2014
$1.9M
CHARACTERIZATION OF THE AH RECEPTOR SIGNALING PATHWAYR01ES005703 · NIEHS · UNIVERSITY OF WISCONSIN MADISON · PI BRADFIELD, CHRISTOPHER A · 1996 to 2001
$786k
Genetic Insight Into AH Receptor-Mediated Promotion Of HepatocarcinogenesisK08ES017283 · NIEHS · UNIVERSITY OF WISCONSIN-MADISON · PI KENNEDY, GREGORY DEAN · 2009 to 2013
$777k
NIDCR NIH HHS R01 DE021255NIDCR NIH HHS R01 DE021255-01NIDDK NIH HHS P30 DK020579NIDDK NIH HHS P30 DK052574NIDDK NIH HHS P30DK052574NIDDK NIH HHS R01 DK064798NIEHS NIH HHS K08 ES017283NIEHS NIH HHS R01 ES005703NIGMS NIH HHS R01 GM055479PHS HHS A1067854
6 · The paper itself

Abstract

Innate lymphoid cells (ILCs) of the ILC22 type protect the intestinal mucosa from infection by secreting interleukin 22 (IL-22). ILC22 cells include NKp46(+) and lymphoid tissue-inducer (LTi)-like subsets that express the aryl hydrocarbon receptor (AHR). Here we found that Ahr(-/-) mice had a considerable deficit in ILC22 cells that resulted in less secretion of IL-22 and inadequate protection against intestinal bacterial infection. Ahr(-/-) mice also lacked postnatally 'imprinted' cryptopatches and isolated lymphoid follicles (ILFs), but not embryonically 'imprinted' Peyer's patches. AHR induced the transcription factor Notch, which was required for NKp46(+) ILCs, whereas LTi-like ILCs, cryptopatches and ILFs were partially dependent on Notch signaling. Thus, AHR was essential for ILC22 cells and postnatal intestinal lymphoid tissues. Moreover, ILC22 subsets were heterogeneous in their requirement for Notch and their effect on the generation of intestinal lymphoid tissues.

Indexed as

AnimalsAntigens, LyFemaleGastrointestinal TractInterleukin-22InterleukinsLymphoid TissueMaleMiceMice, Inbred C57BLMice, TransgenicNatural Cytotoxicity Triggering Receptor 1Receptor, Notch1Receptor, Notch2Receptors, Aryl HydrocarbonSignal TransductionAntigens, LyInterleukin-22InterleukinsNatural Cytotoxicity Triggering Receptor 1Ncr1 protein, mouseNotch1 protein, mouseNotch2 protein, mouseReceptor, Notch1Receptor, Notch2Receptors, Aryl Hydrocarbon

Identifiers

PMID22101730
PMCPMC3468413
OpenAlexW2068162195

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.