Evidence map›Paper›PMID 22100529›Full record

ArticleThe Plant cell2011

The phosphoglucan phosphatase like sex Four2 dephosphorylates starch at the C3-position in Arabidopsis.

Diana Santelia, Oliver Kötting, David Seung, Mario Schubert, Matthias Thalmann, Sylvain Bischof, David A Meekins, Andy Lutz, Nicola Patron, Matthew S Gentry and 2 more

Open access · hybridAbstract read
In one paragraph

Article in The Plant cell, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 66 papers.

0numbers the graph read from it
0cells of the map it votes in
66citing papers in PubMed
6.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

66 citing papers in PubMed, 132 citations in OpenAlex.

  1. Review
  2. A structural perspective on α-glucan catabolism in oxygenic phototrophs.The Plant journal : for cell and molecular biology · 2026
    Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Emerging Functions of Protein Tyrosine Phosphatases in Plants.International journal of molecular sciences · 2024
    Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article

6 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 3 countries.

Diana SanteliaInstitute for Agricultural Sciences, ETH Zurich, 8092 Zurich, Switzerland. dsantelia@ethz.ch
Oliver Kötting
David Seung
Mario Schubert
Matthias Thalmann
Sylvain Bischof
David A Meekins
Andy Lutz
Nicola Patron
Matthew S Gentry
Frédéric H-T Allain
Samuel C Zeeman
ETH Zurich · CHUniversity of Kentucky · USAgriculture Victoria · AU

Funding

Regulation, Signaling, and Dynamics of Glucan PhosphatasesR01NS070899 · NINDS · UNIVERSITY OF KENTUCKY · PI GENTRY, MATTHEW S. · 2010 to 2019
$3.6M
Novel Model Systems Link Floridean Starch Metabolism to Lafora DiseaseR00NS061803 · NINDS · UNIVERSITY OF KENTUCKY · PI GENTRY, MATTHEW S. · 2008 to 2010
$696k
NCRR NIH HHS P20RR0202171NINDS NIH HHS R00 NS061803NINDS NIH HHS R00NS061803NINDS NIH HHS R01 NS070899NINDS NIH HHS R01NS070899
6 · The paper itself

Abstract

Starch contains phosphate covalently bound to the C6-position (70 to 80% of total bound phosphate) and the C3-position (20 to 30%) of the glucosyl residues of the amylopectin fraction. In plants, the transient phosphorylation of starch renders the granule surface more accessible to glucan hydrolyzing enzymes and is required for proper starch degradation. Phosphate also confers desired properties to starch-derived pastes for industrial applications. In Arabidopsis thaliana, the removal of phosphate by the glucan phosphatase Starch Excess4 (SEX4) is essential for starch breakdown. We identified a homolog of SEX4, LSF2 (Like Sex Four2), as a novel enzyme involved in starch metabolism in Arabidopsis chloroplasts. Unlike SEX4, LSF2 does not have a carbohydrate binding module. Nevertheless, it binds to starch and specifically hydrolyzes phosphate from the C3-position. As a consequence, lsf2 mutant starch has elevated levels of C3-bound phosphate. SEX4 can release phosphate from both the C6- and the C3-positions, resulting in partial functional overlap with LSF2. However, compared with sex4 single mutants, the lsf2 sex4 double mutants have a more severe starch-excess phenotype, impaired growth, and a further change in the proportion of C3- and C6-bound phosphate. These findings significantly advance our understanding of the metabolism of phosphate in starch and provide innovative options for tailoring novel starches with improved functionality for industry.

Indexed as

AmylopectinArabidopsisArabidopsis ProteinsChloroplastsDual-Specificity PhosphatasesGlucansModels, MolecularMutationPhenotypePhosphatesProtein ConformationSequence Homology, Amino AcidStarchSubstrate SpecificityAmylopectinArabidopsis ProteinsAt3g52180 protein, ArabidopsisDual-Specificity PhosphatasesGlucansLSF2 protein, ArabidopsisPhosphatesStarch

Identifiers

PMID22100529
PMCPMC3246334
OpenAlexW2139807694

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.