Evidence map›Paper›PMID 22096018›Full record

ArticleRNA (New York, N.Y.)2012

Production of artificial piRNAs in flies and mice.

Felix Muerdter, Ivan Olovnikov, Antoine Molaro, Nikolay V Rozhkov, Benjamin Czech, Assaf Gordon, Gregory J Hannon, Alexei A Aravin

Abstract read
In one paragraph

Article in RNA (New York, N.Y.), 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 70 papers.

0numbers the graph read from it
0cells of the map it votes in
70citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

70 citing papers in PubMed.

  1. Review
  2. Article
  3. AbioRxiv : the preprint server for biology · 2026
    Article
  4. Rapid evolution and comparative analysis of piRNA clusters inbioRxiv : the preprint server for biology · 2026
    Article
  5. Article
  6. Article
  7. Review
  8. Paramutation-Like Behavior of Genic piRNA-Producing Loci inInternational journal of molecular sciences · 2025
    Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. The birth of piRNAs: how mammalian piRNAs are produced, originated, and evolved.Mammalian genome : official journal of the International Mammalian Genome Society · 2022
    Review
  16. Article
  17. Review
  18. Article
  19. Article
  20. Review

10 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Felix MuerdterHoward Hughes Medical Institute, Watson School of Biological Sciences, Cold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724, USA.
Ivan Olovnikov
Antoine Molaro
Nikolay V Rozhkov
Benjamin Czech
Assaf Gordon
Gregory J Hannon
Alexei A Aravin

Funding

Single-Cell Biology Shared ResourceP30CA045508 · NCI · COLD SPRING HARBOR LABORATORY · PI John Edward Moses · 1987 to 2026
$118.9M
MECHANISMS OF DSRNA-INDUCED GENE SILENCINGR01GM062534 · NIGMS · COLD SPRING HARBOR LABORATORY · PI HANNON, GREGORY J · 2000 to 2012
$4.3M
Molecular Mechanism of the piRNA BiogenesisR01GM097363 · NIGMS · CORNELL UNIVERSITY · PI ARAVIN, ALEXEI A. · 2011 to 2025
$4.0M
Taming of Small RNA-based Epigenetic MechanismsDP2OD007371 · OD · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI ARAVIN, ALEXEI A. · 2010 to 2010
$2.4M
Functions of Piwi proteins and short RNAs in germlineR00HD057233 · NICHD · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI ARAVIN, ALEXEI A. · 2010 to 2012
$738k
NCI NIH HHS P30 CA045508NICHD NIH HHS R00 HD057233NIGMS NIH HHS 5R01GM062534NIGMS NIH HHS R01 GM062534NIGMS NIH HHS R01 GM097363NIH HHS DP2 OD007371NIH HHS DP2 OD007371A
6 · The paper itself

Abstract

In animals a discrete class of small RNAs, the piwi-interacting RNAs (piRNAs), guard germ cell genomes against the activity of mobile genetic elements. piRNAs are generated, via an unknown mechanism, from apparently single-stranded precursors that arise from discrete genomic loci, termed piRNA clusters. Presently, little is known about the signals that distinguish a locus as a source of piRNAs. It is also unknown how individual piRNAs are selected from long precursor transcripts. To address these questions, we inserted new artificial sequence information into piRNA clusters and introduced these marked clusters as transgenes into heterologous genomic positions in mice and flies. Profiling of piRNA from transgenic animals demonstrated that artificial sequences were incorporated into the piRNA repertoire. Transgenic piRNA clusters are functional in non-native genomic contexts in both mice and flies, indicating that the signals that define piRNA generative loci must lie within the clusters themselves rather than being implicit in their genomic position. Comparison of transgenic animals that carry insertions of the same artificial sequence into different ectopic piRNA-generating loci showed that both local and long-range sequence environments inform the generation of individual piRNAs from precursor transcripts.

Indexed as

AnimalsDrosophila melanogasterMiceMice, TransgenicRNA, Small InterferingRNA, Small Interfering

Identifiers

PMID22096018
PMCPMC3261743

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.