Evidence map›Paper›PMID 22095694›Full record

ArticleAmerican journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics2012

Evidence for involvement of GNB1L in autism.

Ying-Zhang Chen, Mark Matsushita, Santhosh Girirajan, Mark Lisowski, Elizabeth Sun, Youngmee Sul, Raphael Bernier, Annette Estes, Geraldine Dawson, Nancy Minshew and 9 more

Open access · bronzeAbstract readCase Reports
In one paragraph

Article in American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed, 1 pooled it
1.5field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 1 synthesis or guideline pooled it, 32 citations in OpenAlex.

  1. Glutamatergic candidate genes in autism spectrum disorder: an overview.Journal of neural transmission (Vienna, Austria : 1996) · 2014
    Pooled it
  2. Article
  3. Article
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  5. Article
  6. Article
  7. Article
  8. Review
  9. Review
  10. Discovery of Rare Mutations in Autism: Elucidating Neurodevelopmental Mechanisms.Neurotherapeutics : the journal of the American Society for Experimental NeuroTherapeutics · 2015
    Review
  11. Review
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 7 institutions in 1 country.

Ying-Zhang ChenDepartment of Medicine (Medical Genetics), University of Washington, Seattle, Washington 98195-7720, USA.
Mark Matsushita
Santhosh Girirajan
Mark Lisowski
Elizabeth Sun
Youngmee Sul
Raphael Bernier
Annette Estes
Geraldine Dawson
Nancy Minshew
Gerard D Shellenberg
Evan E Eichler
Mark J Rieder
Deborah A Nickerson
Debby W Tsuang
Ming T Tsuang
Ellen M Wijsman
Wendy H Raskind
Zoran Brkanac
University of Washington · USUniversity of Washington Medical Center · USHoward Hughes Medical Institute · USUniversity of California San Diego · USUniversity of North Carolina at Chapel Hill · USUniversity of Pennsylvania · USUniversity of Pittsburgh · US

Funding

Northwest Genomics CenterUC2HL102926 · NHLBI · UNIVERSITY OF WASHINGTON · PI GREEN, PHILIP P, NICKERSON, DEBORAH A · 2010 to 2010
$14.0M
Northwest Genomics CenterRC2HL102926 · NHLBI · UNIVERSITY OF WASHINGTON · PI GREEN, PHILIP P, NICKERSON, DEBORAH A · 2009 to 2009
$11.0M
UW Autism Center of ExcellenceP50HD055782 · NICHD · UNIVERSITY OF WASHINGTON · PI KING, BRYAN H · 2007 to 2011
$11.0M
SYSTEMS CONNECTIVITY + BRAIN ACTIVATION:IMAGING STUDIES OF LANGUAGE + PERCEPTIONP50HD055748 · NICHD · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI MINSHEW, NANCY J · 2007 to 2011
$9.7M
SENSORY, MOTOR, AND EXECUTIVE DEFICITS IN AUTISMU19HD035469 · NICHD · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI MINSHEW, NANCY J · 2002 to 2006
$8.6M
Next Generation gene discovery in neurogeneticsR01NS069719 · NINDS · UNIVERSITY OF WASHINGTON · PI RASKIND, WENDY H · 2010 to 2019
$5.0M
Next Generation Mendelian GeneticsRC2HG005608 · NHGRI · UNIVERSITY OF WASHINGTON · PI BAMSHAD, MICHAEL JOSEPH, NICKERSON, DEBORAH A · 2009 to 2010
$3.9M
Genetics of Endophenotypes and SchizophreniaR01MH065558 · NIMH · UNIVERSITY OF WASHINGTON · PI TSUANG, DEBBY WEN · 2003 to 2013
$3.7M
Next Generation Gene Discovery in Familial AutismR01MH092367 · NIMH · UNIVERSITY OF WASHINGTON · PI BRKANAC, ZORAN · 2011 to 2015
$3.3M
Genomic Identification of Autism LociR01HD065285 · NICHD · UNIVERSITY OF WASHINGTON · PI EICHLER, EVAN · 2009 to 2010
$2.6M
NEUROBIOLOGIC AND COGNITIVE MECHANISMS OF AUTISMP01HD035469 · NICHD · MELLON PITTS CORPORATION (MPC CORP) · PI MINSHEW, NANCY J · 1997 to 2001
$2.6M
WHI Sequencing Project (WHISP)UC2HL102924 · NHLBI · OHIO STATE UNIVERSITY · PI CARLSON, CHRISTOPHER S, JACKSON, REBECCA D · 2010 to 2010
$2.4M
Howard Hughes Medical InstituteNHGRI NIH HHS HG005608NHGRI NIH HHS RC2 HG005608NHLBI NIH HHS HL 1029230NHLBI NIH HHS HL 102924NHLBI NIH HHS HL 102926NHLBI NIH HHS RC2 HL102924NHLBI NIH HHS RC2 HL102926NHLBI NIH HHS UC2 HL102924NHLBI NIH HHS UC2 HL102926NICHD NIH HHS HD035469NICHD NIH HHS HD055782NICHD NIH HHS HD065285NICHD NIH HHS P01 HD035469NICHD NIH HHS P50 HD055748NICHD NIH HHS P50 HD055782NICHD NIH HHS R01 HD065285NICHD NIH HHS U19 HD035469NIMH NIH HHS MH065558NIMH NIH HHS MH092367NIMH NIH HHS R01 MH065558NIMH NIH HHS R01 MH092367NINDS NIH HHS NS069719NINDS NIH HHS R01 NS069719
6 · The paper itself

Abstract

Structural variations in the chromosome 22q11.2 region mediated by nonallelic homologous recombination result in 22q11.2 deletion (del22q11.2) and 22q11.2 duplication (dup22q11.2) syndromes. The majority of del22q11.2 cases have facial and cardiac malformations, immunologic impairments, specific cognitive profile and increased risk for schizophrenia and autism spectrum disorders (ASDs). The phenotype of dup22q11.2 is frequently without physical features but includes the spectrum of neurocognitive abnormalities. Although there is substantial evidence that haploinsufficiency for TBX1 plays a role in the physical features of del22q11.2, it is not known which gene(s) in the critical 1.5 Mb region are responsible for the observed spectrum of behavioral phenotypes. We identified an individual with a balanced translocation 46,XY,t(1;22)(p36.1;q11.2) and a behavioral phenotype characterized by cognitive impairment, autism, and schizophrenia in the absence of congenital malformations. Using somatic cell hybrids and comparative genomic hybridization (CGH) we mapped the chromosome-22 breakpoint within intron 7 of the GNB1L gene. Copy number evaluations and direct DNA sequencing of GNB1L in 271 schizophrenia and 513 autism cases revealed dup22q11.2 in two families with autism and private GNB1L missense variants in conserved residues in three families (P = 0.036). The identified missense variants affect residues in the WD40 repeat domains and are predicted to have deleterious effects on the protein. Prior studies provided evidence that GNB1L may have a role in schizophrenia. Our findings support involvement of GNB1L in ASDs as well.

Indexed as

Genetic Predisposition to DiseaseAdolescentAutistic DisorderBase SequenceCase-Control StudiesChildChild, PreschoolChromosome BreakageDNA Copy Number VariationsDNA Mutational AnalysisFamilyFemaleGene DuplicationHumansInfant, NewbornIntracellular Signaling Peptides and ProteinsGNB1L protein, humanIntracellular Signaling Peptides and Proteins

Identifiers

PMID22095694
PMCPMC3270696
OpenAlexW1963608498

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.