Evidence map›Paper›PMID 22094644›Full record

ArticleNeuroImage2012

Along-tract statistics allow for enhanced tractography analysis.

John B Colby, Lindsay Soderberg, Catherine Lebel, Ivo D Dinov, Paul M Thompson, Elizabeth R Sowell

Abstract read
In one paragraph

Article in NeuroImage, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 123 papers.

0numbers the graph read from it
0cells of the map it votes in
123citing papers in PubMed
8.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

123 citing papers in PubMed, 245 citations in OpenAlex.

  1. Review
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  18. Surface-based Analyses of Diffusional Kurtosis Imaging in Amyotrophic Lateral Sclerosis: Relationship with Onset Subtypes.Magnetic resonance in medical sciences : MRMS : an official journal of Japan Society of Magnetic Resonance in Medicine · 2025
    Article
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  20. Article

63 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

John B ColbyDepartment of Neurology, University of California Los Angeles, Los Angeles, CA, USA.
Lindsay Soderberg
Catherine Lebel
Ivo D Dinov
Paul M Thompson
Elizabeth R Sowell
University of California, Los Angeles · USChildren's Hospital of Los Angeles · US

Funding

UCLA-Caltech Medical Scientist Training ProgramT32GM008042 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI AJIJOLA, OLUJIMI A, DAWSON, DAVID WAYNE · 1985 to 2023
$29.9M
Center for Computational Biology (RMI)U54RR021813 · NCRR · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI TOGA, ARTHUR W · 2004 to 2010
$25.3M
YALE CENTER FOR THE: LEARNING &ATTENTIONP41RR013642 · NCRR · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI BEARER, ELAINE L · 1998 to 2011
$21.9M
Mapping the Brain, the Face, and Neurocognitive Function in FASD (U01)U01AA017122 · NIAAA · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI SOWELL, ELIZABETH R · 2007 to 2016
$5.9M
Imaging Brain, Neurocognitive and Pubertal Maturation During AdolescenceR01MH087563 · NIMH · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI SOWELL, ELIZABETH R · 2010 to 2014
$3.4M
Longitudinal Mapping of Maturational Change in Brain Function-Structure RelationsR01HD053893 · NICHD · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI SOWELL, ELIZABETH R · 2008 to 2012
$2.9M
Longitudinal MRI in Prenatal Methamphetamine or Alcohol ExposureR01DA017830 · NIDA · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI SOWELL, ELIZABETH R · 2004 to 2008
$2.5M
Comprehensive Training in Neuroimaging Fundamentals and ApplicationsR90DA023422 · NIDA · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI COHEN, MARK STEVEN · 2006 to 2015
$1.7M
Comprehensive Training in Neuroimaging Fundamentals and ApplicationsT90DA022768 · NIDA · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI COHEN, MARK STEVEN · 2006 to 2015
$1.5M
White matter maturation and executive function advances in fetal alcohol exposureF30AA020431 · NIAAA · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI COLBY, JOHN BENJAMIN · 2011 to 2013
$127k
NCRR NIH HHS P41 RR013642NCRR NIH HHS U54 RR021813NCRR NIH HHS U54RR021813NIAAA NIH HHS F30 AA020431NIAAA NIH HHS U01 AA017122NICHD NIH HHS R01 HD053893NIDA NIH HHS R01 DA017830NIDA NIH HHS R90 DA023422NIDA NIH HHS T90 DA022768NIGMS NIH HHS T32 GM008042NIMH NIH HHS R01 MH087563
6 · The paper itself

Abstract

Diffusion imaging tractography is a valuable tool for neuroscience researchers because it allows the generation of individualized virtual dissections of major white matter tracts in the human brain. It facilitates between-subject statistical analyses tailored to the specific anatomy of each participant. There is prominent variation in diffusion imaging metrics (e.g., fractional anisotropy, FA) within tracts, but most tractography studies use a "tract-averaged" approach to analysis by averaging the scalar values from the many streamline vertices in a tract dissection into a single point-spread estimate for each tract. Here we describe a complete workflow needed to conduct an along-tract analysis of white matter streamline tract groups. This consists of 1) A flexible MATLAB toolkit for generating along-tract data based on B-spline resampling and compilation of scalar data at different collections of vertices along the curving tract spines, and 2) Statistical analysis and rich data visualization by leveraging tools available through the R platform for statistical computing. We demonstrate the effectiveness of such an along-tract approach over the tract-averaged approach in an example analysis of 10 major white matter tracts in a single subject. We also show that these techniques easily extend to between-group analyses typically used in neuroscience applications, by conducting an along-tract analysis of differences in FA between 9 individuals with fetal alcohol spectrum disorders (FASDs) and 11 typically-developing controls. This analysis reveals localized differences between FASD and control groups that were not apparent using a tract-averaged method. Finally, to validate our approach and highlight the strength of this extensible software framework, we implement 2 other methods from the literature and leverage the existing workflow tools to conduct a comparison study.

Indexed as

AdolescentAnisotropyBrain MappingFemaleFetal Alcohol Spectrum DisordersFunctional NeuroimagingHumansImage EnhancementMale

Identifiers

PMID22094644
PMCPMC3288584
OpenAlexW2111865947

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.