Evidence map›Paper›PMID 22094255›Full record

ArticleCancer cell2011

Oxidative damage targets complexes containing DNA methyltransferases, SIRT1, and polycomb members to promoter CpG Islands.

Heather M O'Hagan, Wei Wang, Subhojit Sen, Christina Destefano Shields, Stella S Lee, Yang W Zhang, Eriko G Clements, Yi Cai, Leander Van Neste, Hariharan Easwaran and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in Cancer cell, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 341 papers.

0numbers the graph read from it
0cells of the map it votes in
341citing papers in PubMed
14.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

341 citing papers in PubMed, 559 citations in OpenAlex.

  1. Dnmt1 associatedEpigenetics · 2026
    Article
  2. Article
  3. Review
  4. Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. Rethinking Oxidative Stress inLife (Basel, Switzerland) · 2026
    Review
  10. Article
  11. Article
  12. Article
  13. Review
  14. Review
  15. Article
  16. Review
  17. 8-Oxoguanine: A Lesion, an Epigenetic Mark, or a Molecular Signal?International journal of molecular sciences · 2025
    Review
  18. Article
  19. Article
  20. Article

281 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors at 1 institution in 1 country.

Heather M O'HaganDepartment of Oncology and The Sidney Kimmel Comprehensive Cancer Center at Johns Hopkins, The Johns Hopkins University School of Medicine, Baltimore, MD 21231, USA.
Wei Wang
Subhojit Sen
Christina Destefano Shields
Stella S Lee
Yang W Zhang
Eriko G Clements
Yi Cai
Leander Van Neste
Hariharan Easwaran
Robert A Casero
Cynthia L Sears
Stephen B Baylin
Johns Hopkins University · US

Funding

Traning Program in Environmental Health SciencesT32ES007141 · NIEHS · JOHNS HOPKINS UNIVERSITY · PI Marsha Wills-Karp · 1985 to 2026
$22.2M
DNA Methyltrasferase Gene Expression in Colon CancerR01ES011858 · NIEHS · JOHNS HOPKINS UNIVERSITY · PI BAYLIN, STEPHEN B., EASWARAN, HARIHARAN · 2002 to 2023
$11.5M
Predoctoral Training Program in Human GeneticsT32GM007814 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI VALLE, DAVID · 1985 to 2021
$10.6M
METHYLATION OF THE CALCITONIN GENE IN HUMAN TUMORSR01CA043318 · NCI · JOHNS HOPKINS UNIVERSITY · PI BAYLIN, STEPHEN B. · 1986 to 2013
$6.0M
Spermine N1-Acetylase Induction in Lung CancersR01CA051085 · NCI · JOHNS HOPKINS UNIVERSITY · PI CASERO, ROBERT A. · 1990 to 2013
$4.7M
The Role of Polyamine Oxidase in Antitumor Drug ResponseR01CA098454 · NCI · JOHNS HOPKINS UNIVERSITY · PI CASERO, ROBERT A. · 2003 to 2013
$2.9M
The Environment and Epigenetic Gene Silencing in CancerR01ES015226 · NIEHS · JOHNS HOPKINS UNIVERSITY · PI BAYLIN, STEPHEN B. · 2006 to 2009
$2.7M
Mechanisms of Interleukin-17 Inflammation Induced by Bacteroides fragilisR01DK080817 · NIDDK · JOHNS HOPKINS UNIVERSITY · PI SEARS, CYNTHIA · 2008 to 2012
$1.7M
Mechanisms of TH17 Inflammation-Induced Colon CarcihogenesisR01CA151325 · NCI · JOHNS HOPKINS UNIVERSITY · PI PARDOLL, DREW M., SEARS, CYNTHIA · 2010 to 2014
$1.6M
Developmental pathways, cancer, and DNA hypermethylationR01CA116160 · NCI · JOHNS HOPKINS UNIVERSITY · PI BAYLIN, STEPHEN B. · 2005 to 2009
$1.6M
NCI NIH HHS CA043318NCI NIH HHS CA51085NCI NIH HHS CA98454NCI NIH HHS R01 CA043318NCI NIH HHS R01 CA051085NCI NIH HHS R01 CA098454NCI NIH HHS R01 CA116160NCI NIH HHS R01 CA151325NCI NIH HHS R01CA151325NIDDK NIH HHS R01 DK080817NIDDK NIH HHS R01DK080817NIEHS NIH HHS ES011858NIEHS NIH HHS ES015226NIEHS NIH HHS ES07141NIEHS NIH HHS R01 ES011858NIEHS NIH HHS T32 ES007141NIGMS NIH HHS T32 GM007814
6 · The paper itself

Abstract

Cancer cells simultaneously harbor global losses and gains in DNA methylation. We demonstrate that inducing cellular oxidative stress by hydrogen peroxide treatment recruits DNA methyltransferase 1 (DNMT1) to damaged chromatin. DNMT1 becomes part of a complex(es) containing DNMT3B and members of the polycomb repressive complex 4. Hydrogen peroxide treatment causes relocalization of these proteins from non-GC-rich to GC-rich areas. Key components are similarly enriched at gene promoters in an in vivo colitis model. Although high-expression genes enriched for members of the complex have histone mark and nascent transcription changes, CpG island-containing low-expression genes gain promoter DNA methylation. Thus, oxidative damage induces formation and relocalization of a silencing complex that may explain cancer-specific aberrant DNA methylation and transcriptional silencing.

Indexed as

Oxidative StressAnimalsChromatinColitisCpG IslandsDNA (Cytosine-5-)-Methyltransferase 1DNA (Cytosine-5-)-MethyltransferasesDNA MethylationDNA Methyltransferase 3BGene Expression Regulation, NeoplasticGene SilencingHCT116 CellsHistonesHumansHydrogen PeroxideMiceChromatinDNA (Cytosine-5-)-Methyltransferase 1DNA (Cytosine-5-)-MethyltransferasesDNA Methyltransferase 3BDNMT1 protein, humanDnmt1 protein, mouseHistonesHydrogen PeroxidePolycomb-Group ProteinsRepressor ProteinsSIRT1 protein, humanSirtuin 1

Identifiers

PMID22094255
PMCPMC3220885
OpenAlexW2168889003

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.