Evidence map›Paper›PMID 22090127›Full record

ArticleJournal of virology2012

Reassortment and mutation of the avian influenza virus polymerase PA subunit overcome species barriers.

Andrew Mehle, Vivien G Dugan, Jeffery K Taubenberger, Jennifer A Doudna

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 90 papers.

0numbers the graph read from it
0cells of the map it votes in
90citing papers in PubMed
6.2field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

90 citing papers in PubMed, 140 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. PA and PA-X: two key proteins from segment 3 of the influenza viruses.Frontiers in cellular and infection microbiology · 2025
    Review
  11. Article
  12. Article
  13. Article
  14. Naturally occurring PAVirologica Sinica · 2024
    Article
  15. Review
  16. Review
  17. Article
  18. Review
  19. Article
  20. Article

30 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

Andrew MehleDepartment of Molecular and Cell Biology, University of California, Berkeley, California, USA. amehle@wisc.edu
Vivien G Dugan
Jeffery K Taubenberger
Jennifer A Doudna
National Institutes of Health · USLawrence Berkeley National Laboratory · USUniversity of California, Berkeley · US

Funding

Influenza Viral Genomics and EvolutionZIAAI000996 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI TAUBENBERGER, JEFFERY · 2009 to 2013
$2.6M
Regulating Influenza Polymerase Structure and Function by PhosphorylationR00GM088484 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI MEHLE, ANDREW · 2012 to 2014
$784k
Regulating Influenza Polymerase Structure and Function by PhosphorylationK99GM088484 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI MEHLE, ANDREW · 2009 to 2010
$180k
Intramural NIH HHSNIGMS NIH HHS K99 GM088484NIGMS NIH HHS K99GM088484NIGMS NIH HHS R00 GM088484
6 · The paper itself

Abstract

The emergence of new pandemic influenza A viruses requires overcoming barriers to cross-species transmission as viruses move from animal reservoirs into humans. This complicated process is driven by both individual gene mutations and genome reassortments. The viral polymerase complex, composed of the proteins PB1, PB2, and PA, is a major factor controlling host adaptation, and reassortment events involving polymerase gene segments occurred with past pandemic viruses. Here we investigate the ability of polymerase reassortment to restore the activity of an avian influenza virus polymerase that is normally impaired in human cells. Our data show that the substitution of human-origin PA subunits into an avian influenza virus polymerase alleviates restriction in human cells and increases polymerase activity in vitro. Reassortants with 2009 pandemic H1N1 PA proteins were the most active. Mutational analyses demonstrated that the majority of the enhancing activity in human PA results from a threonine-to-serine change at residue 552. Reassortant viruses with avian polymerases and human PA subunits, or simply the T552S mutation, displayed faster replication kinetics in culture and increased pathogenicity in mice compared to those containing a wholly avian polymerase complex. Thus, the acquisition of a human PA subunit, or the signature T552S mutation, is a potential mechanism to overcome the species-specific restriction of avian polymerases and increase virus replication. Our data suggest that the human, avian, swine, and 2009 H1N1-like viruses that are currently cocirculating in pig populations set the stage for PA reassortments with the potential to generate novel viruses that could possess expanded tropism and enhanced pathogenicity.

Indexed as

MutationReassortant VirusesAnimalsCell LineHumansInfluenza A virusSpecies Specificity

Identifiers

PMID22090127
PMCPMC3264373
OpenAlexW1975257452

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.