Evidence map›Paper›PMID 22088575›Full record

ArticleGene2012

A complex multilevel attack on Pseudomonas aeruginosa algT/U expression and algT/U activity results in the loss of alginate production.

Robert Sautter, Damaris Ramos, Lisa Schneper, Oana Ciofu, Tina Wassermann, Chong-Lek Koh, Arne Heydorn, Morton Hentzer, Niels Høiby, Arsalan Kharazmi and 4 more

Abstract read
In one paragraph

Article in Gene, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed.

  1. Review
  2. Article
  3. Journal of bacteriology · 2024
    Article
  4. Frontiers in cellular and infection microbiology · 2024
    Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Determining the Different Mechanisms Used byFrontiers in microbiology · 2020
    Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Robert SautterDepartment of Biological Sciences, College of Arts and Sciences, Florida International University, Miami, FL 33199, USA.
Damaris Ramos
Lisa Schneper
Oana Ciofu
Tina Wassermann
Chong-Lek Koh
Arne Heydorn
Morton Hentzer
Niels Høiby
Arsalan Kharazmi
Søren Molin
Caroline A Devries
Dennis E Ohman
Kalai Mathee

Funding

MBRS RESEARCH INITIATIVE FOR SCIENTIFIC ENHANCEMENTR25GM061347 · NIGMS · FLORIDA INTERNATIONAL UNIVERSITY · PI LICKLITER, ROBERT E · 2000 to 2016
$14.7M
GENETICS OF ALGINATE BIOSYNTHESIS IN P. AERUGINOSAR01AI019146 · NIAID · VIRGINIA COMMONWEALTH UNIVERSITY · PI OHMAN, DENNIS EDWARD · 1985 to 2011
$2.7M
Activation of Alginate Genes in Pseudomonas aeruginosaR56AI019146 · NIAID · VIRGINIA COMMONWEALTH UNIVERSITY · PI OHMAN, DENNIS EDWARD · 2006 to 2013
$682k
Pathogenic Mechanism for Lung Infection in Mucoid PseudomonasI01BX000477 · VA · VA VETERANS ADMINISTRATION HOSPITAL · PI OHMAN, DENNIS EDWARD, ZHOU, HUIPING · 2011 to 2025
–
BLRD VA I01 BX000477NIAID NIH HHS AI-19146NIAID NIH HHS R01 AI019146NIAID NIH HHS R56 AI019146NIGMS NIH HHS R25 GM061347NIGMS NIH HHS R25 GM61347
6 · The paper itself

Abstract

Infection by the opportunistic pathogen Pseudomonas aeruginosa is a leading cause of morbidity and mortality seen in cystic fibrosis (CF) patients. This is mainly due to the genotypic and phenotypic changes of the bacteria that cause conversion from a typical nonmucoid to a mucoid form in the CF lung. Mucoid conversion is indicative of overproduction of a capsule-like polysaccharide called alginate. The alginate-overproducing (Alg(+)) mucoid phenotype seen in the CF isolates is extremely unstable. Low oxygen tension growth of mucoid variants readily selects for nonmucoid variants. The switching off mechanism has been mapped to the algT/U locus, and the molecular basis for this conversion was partially attributed to mutations in the algT/U gene itself. To further characterize molecular changes resulting in the unstable phenotype, an isogenic PAO1 derivative that is constitutively Alg(+) due to the replacement of the mucA with mucA22 (PDO300) was used. The mucA22 allele is common in mucoid CF isolates. Thirty-four spontaneous nonmucoid variants, or sap (suppressor of alginate production) mutants, of PDO300 were isolated under low oxygen tension. About 40% of the sap mutants were rescued by a plasmid carrying algT/U (Group A). The remaining sap mutants were not (Group B). The members of Group B fall into two subsets: one similar to PAO1, and another comparable to PDO300. Sequence analysis of the algT/U and mucA genes in Group A shows that mucA22 is intact, whereas algT/U contains mutations. Genetic complementation and sequencing of one Group B sap mutant, sap22, revealed that the nonmucoid phenotype was due to the presence of a mutation in PA3257. PA3257 encodes a putative periplasmic protease. Mutation of PA3257 resulted in decreased algT/U expression. Thus, inhibition of algT/U is a primary mechanism for alginate synthesis suppression.

Indexed as

AlginatesAmino Acid SequenceBacterial Outer Membrane ProteinsBacterial ProteinsBase Sequencebeta-LactamasesDNA Transposable ElementsGene Expression Regulation, BacterialGenetic Complementation TestGlucuronic AcidHexuronic AcidsMicrobial Sensitivity TestsMolecular Sequence DataMutationPeptide HydrolasesPseudomonas aeruginosaAlginatesAlgU protein, Pseudomonas aeruginosaBacterial Outer Membrane ProteinsBacterial Proteinsbeta-LactamasesDNA Transposable ElementsGlucuronic AcidHexuronic AcidsMucA protein, PseudomonasPeptide HydrolasesSigma Factor

Identifiers

PMID22088575
PMCPMC4968699

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.