Evidence map›Paper›PMID 22087535›Full record

ArticleJournal of medicinal chemistry2012

Comparative study of the affinity and metabolism of type I and type II binding quinoline carboxamide analogues by cytochrome P450 3A4.

Upendra P Dahal, Carolyn Joswig-Jones, Jeffrey P Jones

Abstract readComparative Study
In one paragraph

Article in Journal of medicinal chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Review
  2. Review
  3. Review
  4. Enzyme Kinetics of Oxidative Metabolism-Cytochromes P450.Methods in molecular biology (Clifton, N.J.) · 2021
    Article
  5. Rapid kinetic methods to dissect steroidogenic cytochrome P450 reaction mechanisms.The Journal of steroid biochemistry and molecular biology · 2016
    Review
  6. Article
  7. Review
  8. Review
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Upendra P DahalDepartment of Chemistry, Washington State University, P.O. Box 644630, Pullman, Washington 99164-4630, United States.
Carolyn Joswig-Jones
Jeffrey P Jones

Funding

Predicting Rates and Regioselectivity in Cytochrome P450 Mediated ReactionsR01GM084546 · NIGMS · WASHINGTON STATE UNIVERSITY · PI JONES, JEFFREY P · 2008 to 2011
$1.4M
NIGMS NIH HHS GM84546NIGMS NIH HHS R01 GM084546
6 · The paper itself

Abstract

Compounds that coordinate to the heme-iron of cytochrome P450 (CYP) enzymes are assumed to increase metabolic stability. However, recently we observed that the type II binding quinoline carboxamide (QCA) compounds were metabolically less stable. To test if the higher intrinsic clearance of type II binding compounds relative to type I binding compounds is general for other metabolic transformations, we synthesized a library of QCA compounds that could undergo N-dealkylation, O-dealkylation, benzylic hydroxylation, and aromatic hydroxylation. The results demonstrated that type II binding QCA analogues were metabolically less stable (2- to 12-fold) at subsaturating concentration compared to type I binding counterparts for all the transformations. When the rates of different metabolic transformations between type I and type II binding compounds were compared, they were found to be in the order of N-demethylation > benzylic hydroxylation> O-demethylation > aromatic hydroxylation. Finally, for the QCA analogues with aza-heteroaromatic rings, we did not detect metabolism in aza-aromatic rings (pyridine, pyrazine, pyrimidine), indicating that electronegativity of the nitrogen can change regioselectivity in CYP metabolism.

Indexed as

AmidesCatalytic DomainCytochrome P-450 CYP3ACytochrome P-450 CYP3A InhibitorsDealkylationHydroxylationProtein BindingPyrazinesPyridinesPyrimidinesQuinolinesSmall Molecule LibrariesStructure-Activity RelationshipSubstrate SpecificityAmidesCytochrome P-450 CYP3ACytochrome P-450 CYP3A InhibitorsPyrazinesPyridinespyrimidinePyrimidinesQuinolinesSmall Molecule Libraries

Identifiers

PMID22087535
PMCPMC3257383

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.