Evidence map›Paper›PMID 22086920›Full record

ArticleThe Journal of biological chemistry2012

Yeast sterol regulatory element-binding protein (SREBP) cleavage requires Cdc48 and Dsc5, a ubiquitin regulatory X domain-containing subunit of the Golgi Dsc E3 ligase.

Emerson V Stewart, S Julie-Ann Lloyd, John S Burg, Christine C Nwosu, Robert E Lintner, Riza Daza, Carsten Russ, Karen Ponchner, Chad Nusbaum, Peter J Espenshade

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 49 citations in OpenAlex.

  1. Article
  2. Review
  3. The Dsc complex and its role in Golgi quality control.Biochemical Society transactions · 2024
    Review
  4. Review
  5. Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Protein quality control in the secretory pathway.The Journal of cell biology · 2019
    Review
  11. Article
  12. Review
  13. Article
  14. Article
  15. Proteostatic Tactics in the Strategy of Sterol Regulation.Annual review of cell and developmental biology · 2017
    Review
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Emerson V StewartDepartment of Cell Biology, Johns Hopkins University School of Medicine, Baltimore, Maryland 21205.
S Julie-Ann LloydDepartment of Cell Biology, Johns Hopkins University School of Medicine, Baltimore, Maryland 21205.
John S BurgDepartment of Cell Biology, Johns Hopkins University School of Medicine, Baltimore, Maryland 21205.
Christine C NwosuDepartment of Cell Biology, Johns Hopkins University School of Medicine, Baltimore, Maryland 21205.
Robert E LintnerGenome Sequencing and Analysis Program, Broad Institute of Massachusetts Institute of Technology and Harvard, Cambridge, Massachusetts 02141.
Riza DazaGenome Sequencing and Analysis Program, Broad Institute of Massachusetts Institute of Technology and Harvard, Cambridge, Massachusetts 02141.
Carsten RussGenome Sequencing and Analysis Program, Broad Institute of Massachusetts Institute of Technology and Harvard, Cambridge, Massachusetts 02141.
Karen PonchnerGenome Sequencing and Analysis Program, Broad Institute of Massachusetts Institute of Technology and Harvard, Cambridge, Massachusetts 02141.
Chad NusbaumGenome Sequencing and Analysis Program, Broad Institute of Massachusetts Institute of Technology and Harvard, Cambridge, Massachusetts 02141.
Peter J EspenshadeDepartment of Cell Biology, Johns Hopkins University School of Medicine, Baltimore, Maryland 21205. Electronic address: peter.espenshade@jhmi.edu.
Massachusetts Institute of Technology · USJohns Hopkins Medicine · USJohns Hopkins University · US

Funding

JHU-UMD Diabetes Research CenterP30DK079637 · NIDDK · JOHNS HOPKINS UNIVERSITY · PI AHIMA, REXFORD S. · 2013 to 2017
$9.7M
Regulation of Cellular Cholesterol HomeostasisR01HL077588 · NHLBI · JOHNS HOPKINS UNIVERSITY · PI ESPENSHADE, PETER J. · 2004 to 2022
$7.8M
NHLBI NIH HHS HL077588NHLBI NIH HHS R01 HL077588NIDDK NIH HHS P30 DK079637
6 · The paper itself

Abstract

Schizosaccharomyces pombe Sre1 is a membrane-bound transcription factor that controls adaptation to hypoxia. Like its mammalian homolog, sterol regulatory element-binding protein (SREBP), Sre1 activation requires release from the membrane. However, in fission yeast, this release occurs through a strikingly different mechanism that requires the Golgi Dsc E3 ubiquitin ligase complex and the proteasome. The mechanistic details of Sre1 cleavage, including the link between the Dsc E3 ligase complex and proteasome, are not well understood. Here, we present results of a genetic selection designed to identify additional components required for Sre1 cleavage. From the selection, we identified two new components of the fission yeast SREBP pathway: Dsc5 and Cdc48. The AAA (ATPase associated with diverse cellular activities) ATPase Cdc48 and Dsc5, a ubiquitin regulatory X domain-containing protein, interact with known Dsc complex components and are required for SREBP cleavage. These findings provide a mechanistic link between the Dsc E3 ligase complex and the proteasome in SREBP cleavage and add to a growing list of similarities between the Dsc E3 ligase and membrane E3 ligases involved in endoplasmic reticulum-associated degradation.

Indexed as

Adenosine TriphosphatasesCarrier ProteinsCell Cycle ProteinsEndoplasmic ReticulumMembrane ProteinsMutagenesisProtein Structure, TertiaryProtein SubunitsProteolysisSchizosaccharomycesSchizosaccharomyces pombe ProteinsSterol Regulatory Element Binding ProteinsUbiquitin-Protein LigasesValosin Containing ProteinAdenosine TriphosphatasesCarrier ProteinsCell Cycle ProteinsDsc5 protein, S pombeMembrane ProteinsProtein SubunitsSchizosaccharomyces pombe ProteinsSre1 protein, S pombeSterol Regulatory Element Binding ProteinsUbiquitin-Protein LigasesValosin Containing Protein

Identifiers

PMID22086920
PMCPMC3249121
OpenAlexW2092908769

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.