Evidence map›Paper›PMID 22086419›Full record

ArticlePlant physiology2012

Direct infusion mass spectrometry of oxylipin-containing Arabidopsis membrane lipids reveals varied patterns in different stress responses.

Hieu Sy Vu, Pamela Tamura, Nadezhda A Galeva, Ratnesh Chaturvedi, Mary R Roth, Todd D Williams, Xuemin Wang, Jyoti Shah, Ruth Welti

Open access · hybridAbstract read
In one paragraph

Article in Plant physiology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
4.7field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 99 citations in OpenAlex.

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  5. Mass spectrometry imaging ofFrontiers in plant science · 2024
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  10. Specific Changes inMetabolites · 2022
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  13. Head-Group Acylation of Chloroplast Membrane Lipids.Molecules (Basel, Switzerland) · 2021
    Review
  14. Article
  15. 12-Frontiers in plant science · 2021
    Review
  16. Article
  17. Leaf Lipid Alterations in Response to Heat Stress ofPlants (Basel, Switzerland) · 2020
    Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 1 country.

Hieu Sy VuKansas Lipidomics Research Center, Division of Biology, Kansas State University, Manhattan, Kansas 66506, USA.
Pamela Tamura
Nadezhda A Galeva
Ratnesh Chaturvedi
Mary R Roth
Todd D Williams
Xuemin Wang
Jyoti Shah
Ruth Welti
University of Missouri–St. Louis · USDonald Danforth Plant Science Center · USKansas State University · USUniversity of Kansas · USUniversity of North Texas · US

Funding

UNDERSTANDING THE ROLE OF SMALL RNAS IN ARABIDOPSIS POLLEN DEVELOPMENTP20RR016475 · NCRR · UNIVERSITY OF KANSAS MEDICAL CENTER · PI ACKLEY, BRIAN DOUGLAS · 2001 to 2011
$38.1M
NCRR NIH HHS P20 RR16475
6 · The paper itself

Abstract

Direct infusion electrospray ionization triple quadrupole precursor scanning for three oxidized fatty acyl anions revealed 86 mass spectral peaks representing polar membrane lipids in extracts from Arabidopsis (Arabidopsis thaliana) infected with Pseudomonas syringae pv tomato DC3000 expressing AvrRpt2 (PstAvr). Quadrupole time-of-flight and Fourier transform ion cyclotron resonance mass spectrometry provided evidence for the presence of membrane lipids containing one or more oxidized acyl chains. The membrane lipids included molecular species of phosphatidylcholine, phosphatidylethanolamine, phosphatidylglycerol, digalactosyldiacylglycerol, monogalactosyldiacylglycerol, and acylated monogalactosyldiacylglycerol. The oxidized chains were identified at the level of chemical formula and included C(18)H(27)O(3) (abbreviated 18:4-O, to indicate four double bond equivalents and one oxygen beyond the carbonyl group), C(18)H(29)O(3) (18:3-O), C(18)H(31)O(3) (18:2-O), C(18)H(29)O(4) (18:3-2O), C(18)H(31)O(4) (18:2-2O), and C(16)H(23)O(3) (16:4-O). Mass spectral signals from the polar oxidized lipid (ox-lipid) species were quantified in extracts of Arabidopsis leaves subjected to wounding, infection by PstAvr, infection by a virulent strain of P. syringae, and low temperature. Ox-lipids produced low amounts of mass spectral signal, 0.1% to 3.2% as much as obtained in typical direct infusion profiling of normal-chain membrane lipids of the same classes. Analysis of the oxidized membrane lipid species and normal-chain phosphatidic acids indicated that stress-induced ox-lipid composition differs from the basal ox-lipid composition. Additionally, different stresses result in the production of varied amounts, different timing, and different compositional patterns of stress-induced membrane lipids. These data form the basis for a working hypothesis that the stress-specific signatures of ox-lipids, like those of oxylipins, are indicative of their functions.

Indexed as

Stress, PhysiologicalArabidopsisFreezingGalactolipidsHost-Pathogen InteractionsMembrane LipidsOxylipinsPhosphatidylcholinesPhosphatidylethanolaminesPlant DiseasesPlant LeavesPseudomonas syringaeSpectrometry, Mass, Electrospray IonizationdigalactosyldiacylglycerolGalactolipidsMembrane LipidsmonogalactosyldiacylglycerolOxylipinsPhosphatidylcholinesphosphatidylethanolaminePhosphatidylethanolamines

Identifiers

PMID22086419
PMCPMC3252110
OpenAlexW2041601209

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.