Evidence map›Paper›PMID 22086400›Full record

ReviewAnalytical and bioanalytical chemistry2012

Fluorescent hybridization probes for nucleic acid detection.

Jia Guo, Jingyue Ju, Nicholas J Turro

Open access · greenAbstract readReview
In one paragraph

Review in Analytical and bioanalytical chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
4.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 93 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Review
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Single-CellFrontiers in cell and developmental biology · 2018
    Article
  12. Fluorogenic PNA probes.Beilstein journal of organic chemistry · 2018
    Review
  13. Article
  14. Article
  15. Article
  16. DNA Antenna Tile-Associated Deoxyribozyme Sensor with Improved Sensitivity.Chembiochem : a European journal of chemical biology · 2016
    Article
  17. Article
  18. Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Jia GuoDepartment of Chemistry, Columbia University, New York, NY 10027, USA.
Jingyue Ju
Nicholas J Turro
Columbia University · US

Funding

Molecular Engineering Approach to Study Long Term Synaptic PlasticityR01NS060762 · NINDS · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI JU, JINGYUE · 2008 to 2011
$2.3M
Single Molecule DNA Sequencing by Fluorescent Nucleotide Reversible TerminatorsR01HG005109 · NHGRI · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI JU, JINGYUE · 2009 to 2011
$1.8M
NHGRI NIH HHS R01 HG005109NINDS NIH HHS R01 NS060762NINDS NIH HHS R01NS060762
6 · The paper itself

Abstract

Due to their high sensitivity and selectivity, minimum interference with living biological systems, and ease of design and synthesis, fluorescent hybridization probes have been widely used to detect nucleic acids both in vivo and in vitro. Molecular beacons (MBs) and binary probes (BPs) are two very important hybridization probes that are designed based on well-established photophysical principles. These probes have shown particular applicability in a variety of studies, such as mRNA tracking, single nucleotide polymorphism (SNP) detection, polymerase chain reaction (PCR) monitoring, and microorganism identification. Molecular beacons are hairpin oligonucleotide probes that present distinctive fluorescent signatures in the presence and absence of their target. Binary probes consist of two fluorescently labeled oligonucleotide strands that can hybridize to adjacent regions of their target and generate distinctive fluorescence signals. These probes have been extensively studied and modified for different applications by modulating their structures or using various combinations of fluorophores, excimer-forming molecules, and metal complexes. This review describes the applicability and advantages of various hybridization probes that utilize novel and creative design to enhance their target detection sensitivity and specificity.

Indexed as

AnimalsFluorescenceHumansInverted Repeat SequencesMolecular Probe TechniquesNucleic Acid HybridizationNucleic AcidsOligonucleotide ProbesNucleic AcidsOligonucleotide Probes

Identifiers

PMID22086400
PMCPMC6609299
OpenAlexW2111610786

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.