Evidence map›Paper›PMID 22086088›Full record

ArticleThe Plant cell2011

O-acetylation of Arabidopsis hemicellulose xyloglucan requires AXY4 or AXY4L, proteins with a TBL and DUF231 domain.

Sascha Gille, Amancio de Souza, Guangyan Xiong, Monique Benz, Kun Cheng, Alex Schultink, Ida-Barbara Reca, Markus Pauly

Open access · hybridAbstract read
In one paragraph

Article in The Plant cell, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 90 papers.

0numbers the graph read from it
0cells of the map it votes in
90citing papers in PubMed
21.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

90 citing papers in PubMed, 174 citations in OpenAlex.

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  11. Plant Cell Wall PolysaccharidePlants (Basel, Switzerland) · 2024
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  14. Insights into pectinCell surface (Amsterdam, Netherlands) · 2023
    Review
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  17. Induced defense strategies of plants againstFrontiers in microbiology · 2023
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30 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Sascha GilleEnergy Biosciences Institute, University of California, Berkeley, California 94720, USA.
Amancio de Souza
Guangyan Xiong
Monique Benz
Kun Cheng
Alex Schultink
Ida-Barbara Reca
Markus Pauly
Energy Biosciences Institute · USUniversity of California, Berkeley · USGreat Lakes Bioenergy Research Center · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In an Arabidopsis thaliana forward genetic screen aimed at identifying mutants with altered structures of their hemicellulose xyloglucan (axy mutants) using oligosaccharide mass profiling, two nonallelic mutants (axy4-1 and axy4-2) that have a 20 to 35% reduction in xyloglucan O-acetylation were identified. Mapping of the mutation in axy4-1 identified AXY4, a type II transmembrane protein with a Trichome Birefringence-Like domain and a domain of unknown function (DUF231). Loss of AXY4 transcript results in a complete lack of O-acetyl substituents on xyloglucan in several tissues, except seeds. Seed xyloglucan is instead O-acetylated by the paralog AXY4like, as demonstrated by the analysis of the corresponding T-DNA insertional lines. Wall fractionation analysis of axy4 knockout mutants indicated that only a fraction containing xyloglucan is non-O-acetylated. Hence, AXY4/AXY4L is required for the O-acetylation of xyloglucan, and we propose that these proteins represent xyloglucan-specific O-acetyltransferases, although their donor and acceptor substrates have yet to be identified. An Arabidopsis ecotype, Ty-0, has reduced xyloglucan O-acetylation due to mutations in AXY4, demonstrating that O-acetylation of xyloglucan does not impact the plant's fitness in its natural environment. The relationship of AXY4 with another previously identified group of Arabidopsis proteins involved in general wall O-acetylation, reduced wall acetylation, is discussed.

Indexed as

AcetylationAcetyltransferasesArabidopsisArabidopsis ProteinsCell WallDNA, BacterialEcotypeGene Knockout TechniquesGlucansMembrane ProteinsMutationPhylogenyPolysaccharidesProtein Structure, TertiarySeedsXylansAcetyltransferasesArabidopsis ProteinsAXY4L protein, ArabidopsisAXY4 protein, ArabidopsisDNA, BacterialGlucanshemicelluloseMembrane ProteinsPolysaccharidesT-DNAXylansxyloglucan

Identifiers

PMID22086088
PMCPMC3246330
OpenAlexW2098915977

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.