Evidence map›Paper›PMID 22085962›Full record

ArticleGenes & development2011

An ARL3-UNC119-RP2 GTPase cycle targets myristoylated NPHP3 to the primary cilium.

Kevin J Wright, Lisa M Baye, Anique Olivier-Mason, Saikat Mukhopadhyay, Liyun Sang, Mandy Kwong, Weiru Wang, Pamela R Pretorius, Val C Sheffield, Piali Sengupta and 2 more

Abstract read
In one paragraph

Article in Genes & development, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 146 papers.

0numbers the graph read from it
0cells of the map it votes in
146citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

146 citing papers in PubMed.

  1. Trial
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Molecular basis for the activation of outer dynein arms in cilia.Nature structural & molecular biology · 2025
    Article
  9. Article
  10. Review
  11. Review
  12. Review
  13. Review
  14. PSKH1 kinase activity is differentially modulated via allosteric binding of CaProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Review
  20. Review

86 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Kevin J WrightGenentech Inc., South San Francisco, California 94080, USA.
Lisa M Baye
Anique Olivier-Mason
Saikat Mukhopadhyay
Liyun Sang
Mandy Kwong
Weiru Wang
Pamela R Pretorius
Val C Sheffield
Piali Sengupta
Diane C Slusarski
Peter K Jackson

Funding

INTERDISCIPLINARY CARDIOVASCULAR RESEARCH FELLOWSHIPT32HL007121 · NHLBI · UNIVERSITY OF IOWA · PI LONDON, BARRY · 1985 to 2020
$15.1M
Interdisciplinary approach to retinal disease gene identificationR01EY017168 · NEI · UNIVERSITY OF IOWA · PI SHEFFIELD, VAL C. · 2007 to 2017
$5.9M
GENETIC ANALYSIS OF SENSORY SPECIFICATION IN C ELEGANSR01GM056223 · NIGMS · BRANDEIS UNIVERSITY · PI SENGUPTA, PIALI · 1997 to 2009
$3.3M
Genetic analysis of sensory specification in C.elegansR37GM056223 · NIGMS · BRANDEIS UNIVERSITY · PI SENGUPTA, PIALI · 2010 to 2016
$2.6M
Wnt/Ca2+ Function in Development and Tumor SuppressionR01CA112369 · NCI · UNIVERSITY OF IOWA · PI SLUSARSKI, DIANE C · 2005 to 2009
$1.1M
Mechanisms generating ciliary structural diversity in C. elegansF31DC010090 · NIDCD · BRANDEIS UNIVERSITY · PI OLIVIER-MASON, ANIQUE JULIENNE · 2009 to 2011
$83k
Howard Hughes Medical InstituteNCI NIH HHS R01 CA112369NCI NIH HHS R01CA112369NEI NIH HHS R01 EY017168NEI NIH HHS R01EY017168NEI NIH HHS R01EY110298NHLBI NIH HHS T32 HL007121NIDCD NIH HHS DC010090NIDCD NIH HHS F31 DC010090NIGMS NIH HHS R01 GM056223NIGMS NIH HHS R37 GM056223NIGMS NIH HHS R37 GM56223
6 · The paper itself

Abstract

The membrane of the primary cilium is a highly specialized compartment that organizes proteins to achieve spatially ordered signaling. Disrupting ciliary organization leads to diseases called ciliopathies, with phenotypes ranging from retinal degeneration and cystic kidneys to neural tube defects. How proteins are selectively transported to and organized in the primary cilium remains unclear. Using a proteomic approach, we identified the ARL3 effector UNC119 as a binding partner of the myristoylated ciliopathy protein nephrocystin-3 (NPHP3). We mapped UNC119 binding to the N-terminal 200 residues of NPHP3 and found the interaction requires myristoylation. Creating directed mutants predicted from a structural model of the UNC119-myristate complex, we identified highly conserved phenylalanines within a hydrophobic β sandwich to be essential for myristate binding. Furthermore, we found that binding of ARL3-GTP serves to release myristoylated cargo from UNC119. Finally, we showed that ARL3, UNC119b (but not UNC119a), and the ARL3 GAP Retinitis Pigmentosa 2 (RP2) are required for NPHP3 ciliary targeting and that targeting requires UNC119b myristoyl-binding activity. Our results uncover a selective, membrane targeting GTPase cycle that delivers myristoylated proteins to the ciliary membrane and suggest that other myristoylated proteins may be similarly targeted to specialized membrane domains.

Indexed as

Adaptor Proteins, Signal TransducingCaenorhabditis elegansIntracellular Signaling Peptides and ProteinsKinesinsMonomeric GTP-Binding ProteinsAmino Acid SequenceAnimalsCaenorhabditis elegans ProteinsCell LineCiliaGene Knockdown TechniquesGTP PhosphohydrolasesMutationPhenotypeProtein BindingProtein Structure, TertiaryAdaptor Proteins, Signal TransducingCaenorhabditis elegans ProteinsGTP PhosphohydrolasesIntracellular Signaling Peptides and ProteinsKinesinsMonomeric GTP-Binding ProteinsZebrafish Proteins

Identifiers

PMID22085962
PMCPMC3222901

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.