Evidence map›Paper›PMID 22084302›Full record

ArticleBiostatistics (Oxford, England)2012

Gene-environment interaction testing in family-based association studies with phenotypically ascertained samples: a causal inference approach.

David W Fardo, Jinze Liu, Dawn L Demeo, Edwin K Silverman, Stijn Vansteelandt

Abstract read
In one paragraph

Article in Biostatistics (Oxford, England), 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

David W FardoDepartment of Biostatistics, Division of Biomedical Informatics, Center for Clinical and Translational Science, University of Kentucky, Lexington, KY 40536, USA. david.fardo@uky.edu
Jinze Liu
Dawn L Demeo
Edwin K Silverman
Stijn Vansteelandt

Funding

ZEBRAFISH VISUAL FUNCTION RECOVERY FOLLOWING OPTIC NERVE DAMAGEP20RR016481 · NCRR · UNIVERSITY OF LOUISVILLE · PI BARTON, HAZEL A · 2001 to 2011
$34.8M
UKY DENTAL COBRE: POLYBACTERIAL PERIODONTITIS: N-3 PUFA AND ANTIOXIDANTSP20RR020145 · NCRR · UNIVERSITY OF KENTUCKY · PI EBERSOLE, JEFFREY L · 2004 to 2011
$18.3M
NCRR NIH HHS 5P20RR016481-10NCRR NIH HHS P20 RR020145NCRR NIH HHS P20RR020145
6 · The paper itself

Abstract

We propose a method for testing gene-environment (G × E) interactions on a complex trait in family-based studies in which a phenotypic ascertainment criterion has been imposed. This novel approach employs G-estimation, a semiparametric estimation technique from the causal inference literature, to avoid modeling of the association between the environmental exposure and the phenotype, to gain robustness against unmeasured confounding due to population substructure, and to acknowledge the ascertainment conditions. The proposed test allows for incomplete parental genotypes. It is compared by simulation studies to an analogous conditional likelihood-based approach and to the QBAT-I test, which also invokes the G-estimation principle but ignores ascertainment. We apply our approach to a study of chronic obstructive pulmonary disorder.

Indexed as

Data Interpretation, StatisticalGene-Environment InteractionModels, GeneticComputer SimulationGenotypeHumansPhenotypePolymorphism, Single NucleotidePulmonary Disease, Chronic Obstructive

Identifiers

PMID22084302
PMCPMC3372944

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.