Evidence map›Paper›PMID 22083316›Full record

ArticleJournal of visualized experiments : JoVE2011

Adhesion frequency assay for in situ kinetics analysis of cross-junctional molecular interactions at the cell-cell interface.

Veronika I Zarnitsyna, Cheng Zhu

Open access · bronzeAbstract readVideo-Audio Media
In one paragraph

Article in Journal of visualized experiments : JoVE, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.7field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Veronika I ZarnitsynaBiomedical Engineering Department, Georgia Institute of Technology, USA.
Cheng Zhu
Georgia Institute of Technology · US

Funding

Mechanical Regulation of Selectin-Ligand Binding KineticsR01AI077343 · NIAID · GEORGIA INSTITUTE OF TECHNOLOGY · PI MCEVER, RODGER PAUL, ZHU, CHENG · 2010 to 2014
$2.5M
Biophysical Analysis of GPIb-VWF InteractionR01HL091020 · NHLBI · GEORGIA INSTITUTE OF TECHNOLOGY · PI ZHU, CHENG · 2008 to 2012
$1.8M
Mechanical Regulation of Binding and Cleavage of VWF by ADAMTS-13R01HL093723 · NHLBI · GEORGIA INSTITUTE OF TECHNOLOGY · PI ZHU, CHENG · 2009 to 2012
$1.5M
Statistical Modeling of Receptor/Ligand Binding Kinetics on the T cell SurfaceR01GM096187 · NIGMS · GEORGIA INSTITUTE OF TECHNOLOGY · PI WU, CHIEN-FU JEFF · 2010 to 2012
$879k
NHLBI NIH HHS R01 HL091020NHLBI NIH HHS R01HL091020NHLBI NIH HHS R01 HL093723NHLBI NIH HHS R01HL093723NIAID NIH HHS R01 AI077343NIAID NIH HHS R01AI077343NIGMS NIH HHS R01 GM096187NIGMS NIH HHS R01GM096187
6 · The paper itself

Abstract

The micropipette adhesion assay was developed in 1998 to measure two-dimensional (2D) receptor-ligand binding kinetics. The assay uses a human red blood cell (RBC) as adhesion sensor and presenting cell for one of the interacting molecules. It employs micromanipulation to bring the RBC into contact with another cell that expresses the other interacting molecule with precisely controlled area and time to enable bond formation. The adhesion event is detected as RBC elongation upon pulling the two cells apart. By controlling the density of the ligands immobilized on the RBC surface, the probability of adhesion is kept in mid-range between 0 and 1. The adhesion probability is estimated from the frequency of adhesion events in a sequence of repeated contact cycles between the two cells for a given contact time. Varying the contact time generates a binding curve. Fitting a probabilistic model for receptor-ligand reaction kinetics to the binding curve returns the 2D affinity and off-rate. The assay has been validated using interactions of Fcγ receptors with IgG Fc, selectins with glycoconjugate ligands, integrins with ligands, homotypical cadherin binding, T cell receptor and coreceptor with peptide-major histocompatibility complexes. The method has been used to quantify regulations of 2D kinetics by biophysical factors, such as the membrane microtopology, membrane anchor, molecular orientation and length, carrier stiffness, curvature, and impingement force, as well as biochemical factors, such as modulators of the cytoskeleton and membrane microenvironment where the interacting molecules reside and the surface organization of these molecules. The method has also been used to study the concurrent binding of dual receptor-ligand species, and trimolecular interactions using a modified model. The major advantage of the method is that it allows study of receptors in their native membrane environment. The results could be very different from those obtained using purified receptors. It also allows study of the receptor-ligand interactions in a sub-second timescale with temporal resolution well beyond the typical biochemical methods. To illustrate the micropipette adhesion frequency method, we show kinetics measurement of intercellular adhesion molecule 1 (ICAM-1) functionalized on RBCs binding to integrin α(L)β(2) on neutrophils with dimeric E-selectin in the solution to activate α(L)β(2).

Indexed as

Cell AdhesionCell CommunicationCytological TechniquesErythrocyte MembraneErythrocytesHumansImmobilized ProteinsKineticsLigandsModels, BiologicalReceptors, Antigen, T-CellReceptors, IgGSelectinsImmobilized ProteinsLigandsReceptors, Antigen, T-CellReceptors, IgGSelectins

Identifiers

PMID22083316
PMCPMC3308619
OpenAlexW1978267197

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.