Evidence map›Paper›PMID 22081396›Full record

ArticleJournal of bacteriology2012

Distinct roles of β-galactosidase paralogues of the rumen bacterium Mannheimia succiniciproducens.

Eun-Gyeong Lee, Seonghun Kim, Doo-Byoung Oh, Sang Yup Lee, Ohsuk Kwon

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Article in Journal of bacteriology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.0field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Eun-Gyeong LeeIntegrative Omics Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, South Korea.
Seonghun Kim
Doo-Byoung Oh
Sang Yup Lee
Ohsuk Kwon
Korea Research Institute of Bioscience and Biotechnology · KRIntelligent Synthetic Biology Center · KRKorea University of Science and Technology · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mannheimia succiniciproducens, a rumen bacterium belonging to the family Pasteurellaceae, has two putative β-galactosidase genes, bgaA and bgaB, encoding polypeptides whose deduced amino acid sequences share 56% identity with each other and show approximately 30% identity to the Escherichia coli gene for LacZ. The M. succiniciproducens bgaA (MsbgaA) gene-deletion mutant was not able to grow on lactose as the sole carbon source, suggesting its essential role in lactose metabolism, whereas the MsbgaB gene-deletion mutant did not show any growth defect on a lactose medium. Furthermore, the expression of the MsbgaA gene was induced by the addition of lactose in the growth medium, whereas the MsbgaB gene was constitutively expressed independently of a carbon source. Biochemical characterization of the recombinant proteins revealed that MsBgaA is more efficient than MsBgaB in hydrolyzing o-nitrophenyl-β-d-galactopyranoside and p-nitrophenyl-β-d-galactopyranoside. MsBgaA was highly specific for the hydrolysis of lactose, with a catalytic efficiency of 46.9 s(-1) mM(-1). However, MsBgaB was more efficient for the hydrolysis of lactulose than lactose, and the catalytic efficiency was 10.0 s(-1) mM(-1). Taken together, our results suggest that the β-galactosidase paralogues of M. succiniciproducens BgaA and BgaB play a critical role in lactose metabolism and in an unknown but likely specific function for rumen bacteria, respectively.

Indexed as

Animalsbeta-GalactosidaseCloning, MolecularGene Expression Regulation, BacterialGene Expression Regulation, EnzymologicHydrogen-Ion ConcentrationLactoseMannheimiaPhylogenyRecombinant ProteinsRumenRuminantsSubstrate SpecificityTemperaturebeta-GalactosidaseLactoseRecombinant Proteins

Identifiers

PMID22081396
PMCPMC3256633
OpenAlexW2108724062

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.