Evidence map›Paper›PMID 22080790›Full record

ArticlePlant signaling & behavior2011

Subcellular evidence for the involvement of peroxisomes in plant isoprenoid biosynthesis.

Marc Clastre, Nicolas Papon, Vincent Courdavault, Nathalie Giglioli-Guivarc'h, Benoit St-Pierre, Andrew J Simkin

Abstract read
In one paragraph

Article in Plant signaling & behavior, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Article
  3. Functional analysis ofFrontiers in plant science · 2022
    Article
  4. Article
  5. Plant Peroxisomes: A Factory of Reactive Species.Frontiers in plant science · 2020
    Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. The peroxisome: an update on mysteries.Histochemistry and cell biology · 2012
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Marc ClastreUniversité François-Rabelais de Tours, EA2106, Biomolécules et Biotechnologies Végétales, Tours, France.
Nicolas Papon
Vincent Courdavault
Nathalie Giglioli-Guivarc'h
Benoit St-Pierre
Andrew J Simkin

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The role of peroxisomes in isoprenoid metabolism, especially in plants, has been questioned in several reports. A recent study of Sapir-Mir et al. revealed that the two isoforms of isopentenyl diphosphate (IPP) isomerase, catalyzing the isomerisation of IPP to dimethylallyl diphosphate (DMAPP) are found in the peroxisome. In this addendum, we provide additional data describing the peroxisomal localization of 5-phosphomevalonate kinase and mevalonate 5-diphosphate decarboxylase, the last two enzymes of the mevalonic acid pathway leading to IPP. This finding was reinforced in our latest report showing that a short isoform of farnesyl diphosphate, using IPP and DMAPP as substrates, is also targeted to the organelle. Therefore, the classical sequestration of isoprenoid biosynthesis between plastids and cytosol/ER can be revisited by including the peroxisome as an additional isoprenoid biosynthetic compartment within plant cells.

Indexed as

ArabidopsisCarbon-Carbon Double Bond IsomerasesCarboxy-LyasesCatharanthusHemiterpenesOrganophosphorus CompoundsPeroxisomesPhosphotransferases (Phosphate Group Acceptor)Plant ProteinsPolyisoprenyl PhosphatesSesquiterpenesTerpenesCarbon-Carbon Double Bond IsomerasesCarboxy-Lyasesfarnesyl pyrophosphateHemiterpenesisopentenyldiphosphate delta-isomeraseisopentenyl pyrophosphateOrganophosphorus Compoundsphosphomevalonate kinasePhosphotransferases (Phosphate Group Acceptor)Plant ProteinsPolyisoprenyl Phosphatespyrophosphomevalonate decarboxylaseSesquiterpenesTerpenes

Identifiers

PMID22080790
PMCPMC3337203

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.