Evidence map›Paper›PMID 22080548›Full record

ArticleNucleic acids research2012

Major submissions tool developments at the European Nucleotide Archive.

Clara Amid, Ewan Birney, Lawrence Bower, Ana Cerdeño-Tárraga, Ying Cheng, Iain Cleland, Nadeem Faruque, Richard Gibson, Neil Goodgame, Christopher Hunter and 17 more

Abstract read
In one paragraph

Article in Nucleic acids research, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Structural basis of biofilm formation mediated by thebioRxiv : the preprint server for biology · 2026
    Article
  2. The IPD-IMGT/HLA Database.Nucleic acids research · 2023
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Ensembl 2013.Nucleic acids research · 2013
    Article
  10. Article
  11. DDBJ new system and service refactoring.Nucleic acids research · 2013
    Article
  12. The IMGT/HLA database.Nucleic acids research · 2013
    Article
  13. Online tools for bioinformatics analyses in nutrition sciences.Advances in nutrition (Bethesda, Md.) · 2012
    Review
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

27 authors.

Clara AmidEuropean Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK. amid@ebi.ac.uk
Ewan Birney
Lawrence Bower
Ana Cerdeño-Tárraga
Ying Cheng
Iain Cleland
Nadeem Faruque
Richard Gibson
Neil Goodgame
Christopher Hunter
Mikyung Jang
Rasko Leinonen
Xin Liu
Arnaud Oisel
Nima Pakseresht
Sheila Plaister
Rajesh Radhakrishnan
Kethi Reddy
Stephane Rivière
Marc Rossello
Alexander Senf
Dimitriy Smirnov
Petra Ten Hoopen
Daniel Vaughan
Robert Vaughan
Vadim Zalunin
Guy Cochrane

Funding

Biotechnology and Biological Sciences Research CouncilWellcome Trust 085532
6 · The paper itself

Abstract

The European Nucleotide Archive (ENA; http://www.ebi.ac.uk/ena), Europe's primary nucleotide sequence resource, captures and presents globally comprehensive nucleic acid sequence and associated information. Covering the spectrum from raw data to assembled and functionally annotated genomes, the ENA has witnessed a dramatic growth resulting from advances in sequencing technology and ever broadening application of the methodology. During 2011, we have continued to operate and extend the broad range of ENA services. In particular, we have released major new functionality in our interactive web submission system, Webin, through developments in template-based submissions for annotated sequences and support for raw next-generation sequence read submissions.

Indexed as

Databases, Nucleic AcidSequence Analysis, DNASequence Analysis, RNAGenomicsHigh-Throughput Nucleotide SequencingInternetMolecular Sequence AnnotationSoftwareUser-Computer Interface

Identifiers

PMID22080548
PMCPMC3245037

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.