Evidence map›Paper›PMID 22078884›Full record

ArticleCell2011

A network of broadly expressed HLH genes regulates tissue-specific cell fates.

Abhishek Bhattacharya, Nicholas E Baker

Open access · bronzeAbstract read
In one paragraph

Article in Cell, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 60 papers.

0numbers the graph read from it
0cells of the map it votes in
60citing papers in PubMed
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

60 citing papers in PubMed, 92 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Extramacrochaetae regulates Notch signaling in thebioRxiv : the preprint server for biology · 2024
    Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Hexagonal patterning of the Drosophila eye.Developmental biology · 2021
    Review
  12. Review
  13. Article
  14. Review
  15. Article
  16. Daughterless, theDisease models & mechanisms · 2020
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Abhishek BhattacharyaDepartment of Genetics, Albert Einstein College of Medicine, 1300 Morris Park Avenue, Bronx, NY 10461, USA.
Nicholas E Baker
Albert Einstein College of Medicine · US

Funding

CELL-CELL INTERACTIONS IN DEVELOPING RETINAR01GM047892 · NIGMS · YESHIVA UNIVERSITY · PI BAKER, NICHOLAS E · 1992 to 2017
$6.9M
NIGMS NIH HHS GM47892NIGMS NIH HHS R01 GM047892
6 · The paper itself

Abstract

Spatial and temporal expression of specific basic-helix-loop-helix (bHLH) transcription factors defines many types of cellular differentiation. We find that a distinct mechanism regulates the much broader expression of the heterodimer partners of these specific factors and impinges on differentiation. In Drosophila, a cross-interacting regulatory network links expression of the E protein Daughterless (Da), which heterodimerizes with bHLH proteins to activate them, with expression of the Id protein Extramacrochaetae (Emc), which antagonizes bHLH proteins. Coupled transcriptional feedback loops maintain the widespread Emc expression that restrains Da expression, opposing bHLH-dependent differentiation while enhancing growth and cell survival. Where extracellular signals repress emc, Da expression can increase. This defines regions of proneural ectoderm independently from the proneural bHLH genes. Similar regulation is found in multiple Drosophila tissues and in mammalian cells and therefore is likely to be a conserved general feature of developmental regulation by HLH proteins.

Indexed as

Gene Expression Regulation, DevelopmentalGene Regulatory NetworksAnimalsBasic Helix-Loop-Helix ProteinsCell LineDrosophila melanogasterDrosophila ProteinsEyeHumansInhibitor of Differentiation Protein 1NeurogenesisRepressor ProteinsSignal TransductionTranscription Factor 3Transcription, GeneticBasic Helix-Loop-Helix ProteinsDa protein, DrosophilaDrosophila Proteinsemc protein, DrosophilaID1 protein, humanInhibitor of Differentiation Protein 1Repressor ProteinsTranscription Factor 3

Identifiers

PMID22078884
PMCPMC3268347
OpenAlexW2090330117

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.