Evidence map›Paper›PMID 22074926›Full record

ArticleThe Journal of biological chemistry2012

Identification and structural characterization of novel cyclotide with activity against an insect pest of sugar cane.

Michelle F S Pinto, Isabel C M Fensterseifer, Ludovico Migliolo, Daniel A Sousa, Guy de Capdville, Jorge W Arboleda-Valencia, Michelle L Colgrave, David J Craik, Beatriz S Magalhães, Simoni C Dias and 1 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 98 citations in OpenAlex.

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  18. Cyclotides from BrazilianJournal of natural products · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 2 countries.

Michelle F S PintoCentro de Análises Proteômicas e Bioquímicas, Programa de Pós-Graduação em Ciências Genômicas e Biotecnologia, Universidade Católica de Brasília, Brasília-DF, Brazil.
Isabel C M FensterseiferCentro de Análises Proteômicas e Bioquímicas, Programa de Pós-Graduação em Ciências Genômicas e Biotecnologia, Universidade Católica de Brasília, Brasília-DF, Brazil.
Ludovico MiglioloCentro de Análises Proteômicas e Bioquímicas, Programa de Pós-Graduação em Ciências Genômicas e Biotecnologia, Universidade Católica de Brasília, Brasília-DF, Brazil.
Daniel A SousaPrograma de Pós-Graduação em Patologia Molecular, Universidade de Brasília, Brasília-DF, Brazil.
Guy de CapdvilleCENARGEN (Centro Nacional de Pesquisa de Recursos Genéticos e Biotecnologia), Embrapa Recursos Genéticos e Biotecnologia, Brasília-DF, Brazil.
Jorge W Arboleda-ValenciaCENARGEN (Centro Nacional de Pesquisa de Recursos Genéticos e Biotecnologia), Embrapa Recursos Genéticos e Biotecnologia, Brasília-DF, Brazil; Departamento de Biologia Celular, Universidade de Brasília, Brasília-DF, Brazil.
Michelle L ColgraveCommonwealth Scientific and Industrial Research Organization Livestock Industries, 306 Carmody Road, St. Lucia, Queensland 4067, Australia.
David J CraikInstitute for Molecular Bioscience, University of Queensland, Brisbane, Queensland 4072, Australia.
Beatriz S MagalhãesCentro de Análises Proteômicas e Bioquímicas, Programa de Pós-Graduação em Ciências Genômicas e Biotecnologia, Universidade Católica de Brasília, Brasília-DF, Brazil.
Simoni C DiasCentro de Análises Proteômicas e Bioquímicas, Programa de Pós-Graduação em Ciências Genômicas e Biotecnologia, Universidade Católica de Brasília, Brasília-DF, Brazil.
Octávio L FrancoCentro de Análises Proteômicas e Bioquímicas, Programa de Pós-Graduação em Ciências Genômicas e Biotecnologia, Universidade Católica de Brasília, Brasília-DF, Brazil. Electronic address: ocfranco@gmail.com.
Universidade Católica de Brasília · BRUniversidade de Brasília · BRBrazilian Agricultural Research Corporation · BRCommonwealth Scientific and Industrial Research Organisation · AUUniversity of Queensland · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cyclotides are a family of plant-derived cyclic peptides comprising six conserved cysteine residues connected by three intermolecular disulfide bonds that form a knotted structure known as a cyclic cystine knot (CCK). This structural motif is responsible for the pronounced stability of cyclotides against chemical, thermal, or proteolytic degradation and has sparked growing interest in this family of peptides. Here, we isolated and characterized a novel cyclotide from Palicourea rigida (Rubiaceae), which was named parigidin-br1. The sequence indicated that this peptide is a member of the bracelet subfamily of cyclotides. Parigidin-br1 showed potent insecticidal activity against neonate larvae of Lepidoptera (Diatraea saccharalis), causing 60% mortality at a concentration of 1 μm but had no detectable antibacterial effects. A decrease in the in vitro viability of the insect cell line from Spodoptera frugiperda (SF-9) was observed in the presence of parigidin-br1, consistent with in vivo insecticidal activity. Transmission electron microscopy and fluorescence microscopy of SF-9 cells after incubation with parigidin-br1 or parigidin-br1-fluorescein isothiocyanate, respectively, revealed extensive cell lysis and swelling of cells, consistent with an insecticidal mechanism involving membrane disruption. This hypothesis was supported by in silico analyses, which suggested that parigidin-br1 is able to complex with cell lipids. Overall, the results suggest promise for the development of parigidin-br1 as a novel biopesticide.

Indexed as

LepidopteraSaccharumAmino Acid SequenceAnimalsCell LineCyclotidesFemaleFluorescein-5-isothiocyanateGene Expression Regulation, PlantInsecticidesModels, MolecularMolecular Sequence DataOrgan SpecificityPhosphorylcholinePhylogenyProtein ConformationCyclotidesdodecylphosphocholineFluorescein-5-isothiocyanateInsecticidesPhosphorylcholine

Identifiers

PMID22074926
PMCPMC3249065
OpenAlexW2076094559

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.