Evidence map›Paper›PMID 22074448›Full record

ArticleBMC plant biology2011

High resolution melting analysis for the detection of EMS induced mutations in wheat SBEIIa genes.

Ermelinda Botticella, Francesco Sestili, Antonio Hernandez-Lopez, Andrew Phillips, Domenico Lafiandra

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Article in BMC plant biology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 58 papers.

0numbers the graph read from it
0cells of the map it votes in
58citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

58 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

5 authors.

Ermelinda BotticellaDepartment of Agriculture, Forests, Nature and Energy, University of Tuscia, 01100 Viterbo, Italy.
Francesco Sestili
Antonio Hernandez-Lopez
Andrew Phillips
Domenico Lafiandra

Funding

Biotechnology and Biological Sciences Research Council BB/E025161/1Biotechnology and Biological Sciences Research Council BB/I000607/1
6 · The paper itself

Abstract

backgroundManipulation of the amylose-amylopectin ratio in cereal starch has been identified as a major target for the production of starches with novel functional properties. In wheat, silencing of starch branching enzyme genes by a transgenic approach reportedly caused an increase of amylose content up to 70% of total starch, exhibiting novel and interesting nutritional characteristics. In this work, the functionality of starch branching enzyme IIa (SBEIIa) has been targeted in bread wheat by TILLING. An EMS-mutagenised wheat population has been screened using High Resolution Melting of PCR products to identify functional SNPs in the three homoeologous genes encoding the target enzyme in the hexaploid genome.

resultsThis analysis resulted in the identification of 56, 14 and 53 new allelic variants respectively for SBEIIa-A, SBEIIa-B and SBEIIa-D. The effects of the mutations on protein structure and functionality were evaluated by a bioinformatic approach. Two putative null alleles containing non-sense or splice site mutations were identified for each of the three homoeologous SBEIIa genes; qRT-PCR analysis showed a significant decrease of their gene expression and resulted in increased amylose content. Pyramiding of different single null homoeologous allowed to isolate double null mutants showing an increase of amylose content up to 21% compared to the control.

conclusionTILLING has successfully been used to generate novel alleles for SBEIIa genes known to control amylose content in wheat. Single and double null SBEIIa genotypes have been found to show a significant increase in amylose content.

Indexed as

Mutation1,4-alpha-Glucan Branching EnzymeAllelesAmyloseComputational BiologyDNA, PlantEthyl MethanesulfonateGene Expression Regulation, PlantGene TargetingGenotypeMolecular Sequence DataPlant ProteinsPolymorphism, Single NucleotideSequence Analysis, DNATriticum1,4-alpha-Glucan Branching EnzymeAmyloseDNA, PlantEthyl MethanesulfonatePlant Proteins

Identifiers

PMID22074448
PMCPMC3228712

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.