Evidence map›Paper›PMID 22072933›Full record

ArticleInternational journal of molecular sciences2011

Comparative Molecular Field Analysis (CoMFA) and Comparative Molecular Similarity Indices Analysis (CoMSIA) studies on α(1A)-adrenergic receptor antagonists based on pharmacophore molecular alignment.

Xin Zhao, Minsheng Chen, Biyun Huang, Hong Ji, Mu Yuan

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

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  9. Machine learningRSC advances · 2021
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  19. QSPR analysis of some agonists and antagonists of α-adrenergic receptors.Medicinal chemistry research : an international journal for rapid communications on design and mechanisms of action of biologically active agents
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Xin ZhaoPharmaceutical Research Center, Guangzhou Medical College, Guangzhou, Guangdong 510182, China; E-Mails: zhaoxin.gy@gmail.com (X.Z.); gzminsheng@vip.163.com (M.C.); guangyihby@126.com (B.H.); dljih@126.com (H.J.).
Minsheng Chen
Biyun Huang
Hong Ji
Mu Yuan

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The α(1A)-adrenergic receptor (α(1A)-AR) antagonist is useful in treating benign prostatic hyperplasia, lower urinary tract symptoms, and cardiac arrhythmia. Three-dimensional quantitative structure-activity relationship (3D-QSAR) studies were performed on a set of α(1A)-AR antagonists of N-aryl and N-nitrogen class. Statistically significant models constructed from comparative molecular field analysis (CoMFA) and comparative molecular similarity indices analysis (CoMSIA) were established based on a training set of 32 ligands using pharmacophore-based molecular alignment. The leave-oneout cross-validation correlation coefficients were q(2) (CoMFA) = 0.840 and q(2) (CoMSIA) = 0.840. The high correlation between the cross-validated/predicted and experimental activities of a test set of 12 ligands revealed that the CoMFA and CoMSIA models were robust (r(2) (pred) (/CoMFA) = 0.694; r(2) (pred) (/CoMSIA) = 0.671). The generated models suggested that electrostatic, hydrophobic, and hydrogen bonding interactions play important roles between ligands and receptors in the active site. Our study serves as a guide for further experimental investigations on the synthesis of new compounds. Structural modifications based on the present 3D-QSAR results may lead to the discovery of other α(1A)-AR antagonists.

Indexed as

Quantitative Structure-Activity RelationshipAdrenergic alpha-1 Receptor AntagonistsBinding SitesCatalytic DomainHydrogen BondingHydrophobic and Hydrophilic InteractionsMolecular Docking SimulationReceptors, Adrenergic, alpha-1Static ElectricityAdrenergic alpha-1 Receptor AntagonistsReceptors, Adrenergic, alpha-1activity predictionCoMFACoMSIAGALAHADpharmacophore-based molecular alignmentα1A-adrenoceptor antagonists

Identifiers

PMID22072933
PMCPMC3211024

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.