Evidence map›Paper›PMID 22070432›Full record

ArticleJournal of the American Chemical Society2011

Membrane-assisted online renaturation for automated microfluidic lectin blotting.

Mei He, Jan Novak, Bruce A Julian, Amy E Herr

Abstract read
In one paragraph

Article in Journal of the American Chemical Society, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
  2. The Intriguing Landscape of Single-Cell Protein Analysis.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2022
    Review
  3. Recent Advances in Microscale Western Blotting.Analytical methods : advancing methods and applications · 2016
    Article
  4. Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. Review
  10. Microfluidic Western blotting.Proceedings of the National Academy of Sciences of the United States of America · 2012
    Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Mei HeDepartment of Bioengineering, University of California, Berkeley, California 94720, USA.
Jan Novak
Bruce A Julian
Amy E Herr
University of Alabama at Birmingham · USUniversity of California, Berkeley · US

Funding

Elucidating IgA Nephropathy through Genetic Studies of IgA1 GlycosylationR01DK082753 · NIDDK · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI GHARAVI, ALI G, NOVAK, JAN · 2009 to 2024
$8.7M
Molecular Basis of Pathogenicity of IgA1-containing Immune ComplexesR01DK078244 · NIDDK · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI JAN NOVAK · 2007 to 2026
$6.0M
Analytical tools for the analysis of clustered O-glycans in clinical samplesR01GM098539 · NIGMS · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI RENFROW, MATTHEW B · 2011 to 2019
$2.7M
Towards High Throughput Proteomics: A Micro/nanofluidic Framework for Blotless WDP2OD007294 · OD · UNIVERSITY OF CALIFORNIA BERKELEY · PI HERR, AMY ELIZABETH · 2010 to 2013
$2.5M
IgA1 glycosylation and receptor interactions in IgA nephropathyR01DK071802 · NIDDK · UNIVERSITY OF CINCINNATI · PI HERR, ANDREW B · 2006 to 2010
$1.5M
Urinary Polypeptide Biomarkers of IgA NephropathyR21DK075868 · NIDDK · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI NOVAK, JAN · 2009 to 2010
$403k
New Animal Model for Studies of mucosal Immunity and IgA NephropathyR21DK083663 · NIDDK · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI NOVAK, JAN · 2010 to 2011
$401k
Molecular Basis of Pathogenicity of IgA1-containing Immune ComplexesR56DK078244 · NIDDK · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI NOVAK, JAN · 2012 to 2012
$92k
NIDDK NIH HHS DK071802NIDDK NIH HHS DK075868NIDDK NIH HHS DK078244NIDDK NIH HHS DK082753NIDDK NIH HHS DK083663NIDDK NIH HHS R01 DK071802NIDDK NIH HHS R01 DK078244NIDDK NIH HHS R01 DK082753NIDDK NIH HHS R21 DK075868NIDDK NIH HHS R21 DK083663NIDDK NIH HHS R56 DK078244NIGMS NIH HHS GM098539NIGMS NIH HHS R01 GM098539NIH HHS DP2 OD007294
6 · The paper itself

Abstract

Aberrant glycosylation plays a pivotal role in a diverse set of diseases, including cancer. A microfluidic lectin blotting platform is introduced to enable and expedite the identification of protein glycosylation based on protein size and affinity for specific lectins. The integrated multistage assay eliminates manual intervention steps required for slab-gel lectin blotting, increases total assay throughput, limits reagent and sample consumption, and is completed using one instrument. The assay comprises non-reducing sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) followed by online post-sizing SDS filtration and lectin-based affinity blotting. Important functionality is conferred through both device and assay advances that enable integration of nanoporous membranes flanking a central microchamber to create sub-nanoliter volume compartments that trap SDS-protein complexes and allow electrophoretic SDS removal with buffer exchange. Recapitulation of protein binding for lectin was optimized through quantitative assessment of SDS-treated green fluorescent protein. Immunoglobulin A1 aberrantly glycosylated with galactose-deficient O-glycans was probed in ~6 min using ~3 μL of sample. This new microfluidic lectin blotting platform provides a rapid and automated assay for the assessment of aberrant glycosylation.

Indexed as

Electrophoresis, MicrochipElectrophoresis, Polyacrylamide GelGlycosylationHumansImmunoglobulin ALectinsProtein DenaturationSodium Dodecyl SulfateImmunoglobulin ALectinsSodium Dodecyl Sulfate

Identifiers

PMID22070432
PMCPMC3267544
OpenAlexW2052983700

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.