ReviewViruses2011
Next generation sequencing technologies for insect virus discovery.
Review in Viruses, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 60 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
60 citing papers in PubMed, 140 citations in OpenAlex.
- Low variability in the capsid gene of a generalist densovirus across lepidopteran hosts and geographic regions.Archives of virology · 2026Article
- Exploring the Virome ofPathogens (Basel, Switzerland) · 2026Article
- The diversity of viral community inFrontiers in microbiology · 2025Article
- Discovery and Identification of Viruses Infecting Oomycetes.Methods in molecular biology (Clifton, N.J.) · 2024Article
- A semi-automated and high-throughput approach for the detection of honey bee viruses in bee samples.PloS one · 2024Article
- Virus replication in the honey bee parasite,Journal of virology · 2023Article
- RNA virus discoveries in the electric ant, Wasmannia auropunctata.Virus genes · 2023Article
- Full genome sequence of a novel iflavirus from the aster leafhopper Macrosteles fascifrons.Virus genes · 2023Article
- Metagenomics analysis reveals presence of the Merida-like virus in Georgia.Frontiers in microbiology · 2023Article
- Diversity of RNA viruses in agricultural insects.Computational and structural biotechnology journal · 2023Review
- Metagenomic analysis of viromes in honey bee colonies (Frontiers in cellular and infection microbiology · 2023Article
- Emerging Risk of Cross-Species Transmission of Honey Bee Viruses in the Presence of Invasive Vespid Species.Insects · 2022Review
- Novel Dicistroviruses in an Unexpected Wide Range of Invertebrates.Food and environmental virology · 2021Article
- Novel RNA Viruses from the Transcriptome of Pheromone Glands in the Pink Bollworm Moth,Insects · 2021Article
- Virus-derived sequences from the transcriptomes of two snail vectors of schistosomiasis,PeerJ · 2021Article
- The RNA Virome and Its Dynamics in an Invasive Fruit Fly, Bactrocera dorsalis, Imply Interactions Between Host and Viruses.Microbial ecology · 2020Article
- Entomopathogenic Viruses in the Neotropics: Current Status and Recently Discovered Species.Neotropical entomology · 2020Review
- Special Issue "Insect Viruses and Pest Management".Viruses · 2020Article
- First Report ofInsects · 2020Article
- A Novel RNA Virus in the Parasitoid WaspViruses · 2020Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
3 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Insects are commonly infected with multiple viruses including those that cause sublethal, asymptomatic, and latent infections. Traditional methods for virus isolation typically lack the sensitivity required for detection of such viruses that are present at low abundance. In this respect, next generation sequencing technologies have revolutionized methods for the discovery and identification of new viruses from insects. Here we review both traditional and modern methods for virus discovery, and outline analysis of transcriptome and small RNA data for identification of viral sequences. We will introduce methods for de novo assembly of viral sequences, identification of potential viral sequences from BLAST data, and bioinformatics for generating full-length or near full-length viral genome sequences. We will also discuss implications of the ubiquity of viruses in insects and in insect cell lines. All of the methods described in this article can also apply to the discovery of viruses in other organisms.
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Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.