Evidence map›Paper›PMID 22068439›Full record

ArticlePlant cell reports2012

Expressed sequence-tag analysis of ovaries of Brachiaria brizantha reveals genes associated with the early steps of embryo sac differentiation of apomictic plants.

Erica Duarte Silveira, Larissa Arrais Guimarães, Diva Maria de Alencar Dusi, Felipe Rodrigues da Silva, Natália Florencio Martins, Marcos Mota do Carmo Costa, Márcio Alves-Ferreira, Vera Tavares de Campos Carneiro

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Article in Plant cell reports, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
5.7field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 42 citations in OpenAlex.

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  10. An Overview of the Genetics and Genomics of theFrontiers in plant science · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Erica Duarte SilveiraEmbrapa Genetic Resources and Biotechnology, Parque Estação Biológica, PqEB, Av. W5 Norte (final) Caixa Postal 02372, 70770917, Brasília DF, Brazil.
Larissa Arrais Guimarães
Diva Maria de Alencar Dusi
Felipe Rodrigues da Silva
Natália Florencio Martins
Marcos Mota do Carmo Costa
Márcio Alves-Ferreira
Vera Tavares de Campos Carneiro
Brazilian Agricultural Research Corporation · BRUniversidade de Brasília · BRUniversidade Federal do Rio de Janeiro · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In apomixis, asexual mode of plant reproduction through seeds, an unreduced megagametophyte is formed due to circumvented or altered meiosis. The embryo develops autonomously from the unreduced egg cell, independently of fertilization. Brachiaria is a genus of tropical forage grasses that reproduces sexually or by apomixis. A limited number of studies have reported the sequencing of apomixis-related genes and a few Brachiaria sequences have been deposited at genebank databases. This work shows sequencing and expression analyses of expressed sequence-tags (ESTs) of Brachiaria genus and points to transcripts from ovaries with preferential expression at megasporogenesis in apomictic plants. From the 11 differentially expressed sequences from immature ovaries of sexual and apomictic Brachiaria brizantha obtained from macroarray analysis, 9 were preferentially detected in ovaries of apomicts, as confirmed by RT-qPCR. A putative involvement in early steps of Panicum-type embryo sac differentiation of four sequences from B. brizantha ovaries: BbrizHelic, BbrizRan, BbrizSec13 and BbrizSti1 is suggested. Two of these, BbrizSti1 and BbrizHelic, with similarity to a gene coding to stress induced protein and a helicase, respectively, are preferentially expressed in the early stages of apomictic ovaries development, especially in the nucellus, in a stage previous to the differentiation of aposporous initials, as verified by in situ hybridization.

Indexed as

Expressed Sequence TagsApomixisBrachiariaFlowersGene Expression Regulation, DevelopmentalGene Expression Regulation, PlantGene LibraryGenes, PlantIn Situ HybridizationMolecular Sequence AnnotationMorphogenesisOligonucleotide Array Sequence AnalysisReverse Transcriptase Polymerase Chain ReactionSeeds

Identifiers

PMID22068439
OpenAlexW2058268182

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.