Evidence map›Paper›PMID 22066957›Full record

ArticleMolecular microbiology2011

An activation domain of plasmid R1 TraI protein delineates stages of gene transfer initiation.

Silvia Lang, Paul C Kirchberger, Christian J Gruber, Adam Redzej, Sandra Raffl, Guenther Zellnig, Klaus Zangger, Ellen L Zechner

Open access · greenAbstract read
In one paragraph

Article in Molecular microbiology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
4.3field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 47 citations in OpenAlex.

  1. Article
  2. Diversity and phage sensitivity to phages of porcine enterotoxigenicApplied and environmental microbiology · 2024
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  5. ssRNA phage penetration triggers detachment of the F-pilus.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  6. Article
  7. Antimicrobial agents and chemotherapy · 2019
    Article
  8. Review
  9. Review
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  11. Article
  12. Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Silvia LangUniversity of Graz, Institute of Molecular Biosciences, Humboldtstrasse 50, 8010 Graz, Austria.
Paul C Kirchberger
Christian J Gruber
Adam Redzej
Sandra Raffl
Guenther Zellnig
Klaus Zangger
Ellen L Zechner
University of Graz · AT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bacterial conjugation is a form of type IV secretion that transports protein and DNA to recipient cells. Specific bacteriophage exploit the conjugative pili and cell envelope spanning protein machinery of these systems to invade bacterial cells. Infection by phage R17 requires F-like pili and coupling protein TraD, which gates the cytoplasmic entrance of the secretion channel. Here we investigate the role of TraD in R17 nucleoprotein uptake and find parallels to secretion mechanisms. The relaxosome of IncFII plasmid R1 is required. A ternary complex of plasmid oriT, TraD and a novel activation domain within the N-terminal 992 residues of TraI contributes a key mechanism involving relaxase-associated properties of TraI, protein interaction and the TraD ATPase. Helicase-associated activities of TraI are dispensable. These findings distinguish for the first time specific protein domains and complexes that process extracellular signals into distinct activation stages in the type IV initiation pathway. The study also provided insights into the evolutionary interplay of phage and the plasmids they exploit. Related plasmid F adapted to R17 independently of TraI. It follows that selection for phage resistance drives not only variation in TraA pilins but diversifies TraD and its binding partners in a plasmid-specific manner.

Indexed as

Gene Transfer, HorizontalVirus InternalizationBacteriolysisConjugation, GeneticDNA HelicasesEscherichia coliEscherichia coli ProteinsFimbriae, BacterialLevivirusMembrane ProteinsModels, BiologicalPlasmidsProtein BindingProtein Interaction MappingProtein MultimerizationReplication OriginDNA HelicasesEscherichia coli ProteinsMembrane ProteinstraD protein, E coliTraI protein, E coli

Identifiers

PMID22066957
PMCPMC3245843
OpenAlexW2121897497

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.