Evidence map›Paper›PMID 22056938›Full record

ArticleJournal of bacteriology2012

Novel roles of SoxR, a transcriptional regulator from Xanthomonas campestris, in sensing redox-cycling drugs and regulating a protective gene that have overall implications for bacterial stress physiology and virulence on a host plant.

Aekkapol Mahavihakanont, Nisanart Charoenlap, Poommaree Namchaiw, Warawan Eiamphungporn, Sorayut Chattrakarn, Paiboon Vattanaviboon, Skorn Mongkolsuk

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
3.3field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 18 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Aekkapol MahavihakanontLaboratory of Biotechnology, Chulabhorn Research Institute, Bangkok, Thailand.
Nisanart Charoenlap
Poommaree Namchaiw
Warawan Eiamphungporn
Sorayut Chattrakarn
Paiboon Vattanaviboon
Skorn Mongkolsuk
Chulabhorn Graduate Institute · THChulabhorn Research Institute · THMahidol University · TH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In Xanthomonas campestris pv. campestris, SoxR likely functions as a sensor of redox-cycling drugs and as a transcriptional regulator. Oxidized SoxR binds directly to its target site and activates the expression of xcc0300, a gene that has protective roles against the toxicity of redox-cycling compounds. In addition, SoxR acts as a noninducible repressor of its own expression. X. campestris pv. campestris requires SoxR both for protection against redox-cycling drugs and for full virulence on a host plant. The X. campestris model of the gene regulation and physiological roles of SoxR represents a novel variant of existing bacterial SoxR models.

Indexed as

Bacterial ProteinsBase SequenceHost-Pathogen InteractionsMolecular Sequence DataOxidation-ReductionPlant DiseasesPromoter Regions, GeneticRaphanusStress, PhysiologicalTranscription FactorsVirulenceXanthomonas campestrisBacterial ProteinsSoxR protein, BacteriaTranscription Factors

Identifiers

PMID22056938
PMCPMC3256661
OpenAlexW1984481327

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.