Evidence map›Paper›PMID 22052904›Full record

ArticleThe Journal of biological chemistry2012

Solution structure and molecular interactions of lamin B receptor Tudor domain.

Stamatis Liokatis, Christian Edlich, Katerina Soupsana, Ioannis Giannios, Parthena Panagiotidou, Konstantinos Tripsianes, Michael Sattler, Spyros D Georgatos, Anastasia S Politou

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 23 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 2 countries.

Stamatis LiokatisLaboratory of Biological Chemistry, School of Medicine, University of Ioannina, GR-45110 Ioannina, Greece.
Christian Edlich
Katerina Soupsana
Ioannis Giannios
Parthena Panagiotidou
Konstantinos Tripsianes
Michael Sattler
Spyros D Georgatos
Anastasia S Politou
University of Ioannina · GRFoundation for Research and Technology Hellas · GRCenter for Integrated Protein Science Munich · DEEuropean Molecular Biology Laboratory · DEHelmholtz Zentrum München · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Lamin B receptor (LBR) is a polytopic protein of the nuclear envelope thought to connect the inner nuclear membrane with the underlying nuclear lamina and peripheral heterochromatin. To better understand the function of this protein, we have examined in detail its nucleoplasmic region, which is predicted to harbor a Tudor domain (LBR-TD). Structural analysis by multidimensional NMR spectroscopy establishes that LBR-TD indeed adopts a classical β-barrel Tudor fold in solution, which, however, features an incomplete aromatic cage. Removal of LBR-TD renders LBR more mobile at the plane of the nuclear envelope, but the isolated module does not bind to nuclear lamins, heterochromatin proteins (MeCP2), and nucleosomes, nor does it associate with methylated Arg/Lys residues through its aromatic cage. Instead, LBR-TD exhibits tight and stoichiometric binding to the "histone-fold" region of unassembled, free histone H3, suggesting an interesting role in histone assembly. Consistent with such a role, robust binding to native nucleosomes is observed when LBR-TD is extended toward its carboxyl terminus, to include an area rich in Ser-Arg residues. The Ser-Arg region, alone or in combination with LBR-TD, binds both unassembled and assembled H3/H4 histones, suggesting that the TD/RS interface may operate as a "histone chaperone-like platform."

Indexed as

Protein FoldingAnimalsChickensHistonesLamin B ReceptorMethyl-CpG-Binding Protein 2Nuclear Magnetic Resonance, BiomolecularProtein Structure, SecondaryProtein Structure, TertiaryReceptors, Cytoplasmic and NuclearTurkeysHistonesLamin B ReceptorMethyl-CpG-Binding Protein 2Receptors, Cytoplasmic and Nuclear

Identifiers

PMID22052904
PMCPMC3256899
OpenAlexW1998550611

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.