Evidence map›Paper›PMID 22050424›Full record

ArticleJournal of proteome research2012

Proteomic analysis of early-responsive redox-sensitive proteins in Arabidopsis.

Hai Wang, Shengbing Wang, Yuqing Lu, Sophie Alvarez, Leslie M Hicks, Xiaochun Ge, Yiji Xia

Abstract read
In one paragraph

Article in Journal of proteome research, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Hydrogen Peroxide and GAAntioxidants (Basel, Switzerland) · 2023
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Plant Proton Pumps and Cytosolic pH-Homeostasis.Frontiers in plant science · 2021
    Review
  14. Review
  15. Article
  16. Article
  17. Glutathionylation primes soluble glyceraldehyde-3-phosphate dehydrogenase for late collapse into insoluble aggregates.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Hai WangState Key Laboratory of Genetic Engineering, Institute of Plant Biology, Department of Biochemistry and Molecular Biology, School of Life Sciences, Fudan University, Shanghai, China.
Shengbing Wang
Yuqing Lu
Sophie Alvarez
Leslie M Hicks
Xiaochun Ge
Yiji Xia

Funding

Dissecting the innate immune response mediated by Arabidopsis Nudix hydrolaseR01GM076420 · NIGMS · DONALD DANFORTH PLANT SCIENCE CENTER · PI XIA, YIJI · 2006 to 2010
$1.1M
NIGMS NIH HHS GM076420NIGMS NIH HHS R01 GM076420
6 · The paper itself

Abstract

Regulation of protein function through oxidative modification has emerged as an important molecular mechanism modulating various biological processes. Here, we report a proteomic study of redox-sensitive proteins in Arabidopsis cells subjected to H(2)O(2) treatment. Four gel-based approaches were employed, leading to the identification of four partially overlapping sets of proteins whose thiols underwent oxidative modification in the H(2)O(2)-treated cells. Using a method based on differential labeling of thiols followed by immunoprecipitation and Western blotting, five of the six selected putative redox-sensitive proteins were confirmed to undergo oxidative modification following the oxidant treatment in Arabidopsis leaves. Another method, which is based on differential labeling of thiols coupled with protein electrophoretic mobility shift assay, was adopted to reveal that one of the H(2)O(2)-sensitive proteins, a homologue of cytokine-induced apoptosis inhibitor 1 (AtCIAPIN1), also underwent oxidative modification in Arabidopsis leaves after treatments with salicylic acid or the peptide elicitor flg22, two inducers of defense signaling. The redox-sensitive proteins identified from the proteomic study are involved in various biological processes such as metabolism, the antioxidant system, protein biosynthesis and processing, and cytoskeleton organization. The identification of novel redox-sensitive proteins will be helpful toward understanding of cellular components or pathways previously unknown to be redox-regulated.

Indexed as

Oxidative StressApoptosis Regulatory ProteinsArabidopsisArabidopsis ProteinsBiotinEthylenediaminesFluoresceinsHydrogen PeroxideOxidantsOxidation-ReductionPeptide FragmentsPeptide MappingPlant LeavesProteomeProteomicsSalicylic Acid5-iodoacetamidofluoresceinApoptosis Regulatory ProteinsArabidopsis ProteinsBiotincytokine-induced apoptosis inhibitor 1, ArabidopsisEthylenediaminesFluoresceinsHydrogen PeroxideN-biotinoyl-N'-iodoacetylethylenediamineOxidantsPeptide FragmentsProteomeSalicylic AcidSulfhydryl Compounds

Identifiers

PMID22050424
PMCPMC3253204

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.