Evidence map›Paper›PMID 22049078›Full record

ArticleThe Journal of biological chemistry2011

Nucleolin protein interacts with microprocessor complex to affect biogenesis of microRNAs 15a and 16.

Brian F Pickering, Dihua Yu, Michael W Van Dyke

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 72 citations in OpenAlex.

  1. RiboCop surveils pre-rRNA processing by Dicer in cellular quiescence.bioRxiv : the preprint server for biology · 2025
    Article
  2. Review
  3. Targeting the Hippo pathway in Schwann cells ameliorates peripheral nerve degeneration via a polypharmacological mechanism.Neurotherapeutics : the journal of the American Society for Experimental NeuroTherapeutics · 2024
    Article
  4. Review
  5. Emerging roles of tRNA-derived small RNAs in cancer biology.Experimental & molecular medicine · 2023
    Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. RNA binding proteins in MLL-rearranged leukemia.Experimental hematology & oncology · 2022
    Review
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Review
  17. Shear stress regulation of miR-93 and miR-484 maturation through nucleolin.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  18. Review
  19. Review
  20. A stress-induced response complex (SIRC) shuttles miRNAs, siRNAs, and oligonucleotides to the nucleus.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Brian F PickeringDepartment of Molecular and Cellular Oncology, The University of Texas MD Anderson Cancer Center, Houston, Texas 77030; Cancer Biology Program, The University of Texas Graduate School of Biomedical Sciences, Houston, Texas 77030. Electronic address: bpickeri@mdanderson.org.
Dihua YuDepartment of Molecular and Cellular Oncology, The University of Texas MD Anderson Cancer Center, Houston, Texas 77030; Cancer Biology Program, The University of Texas Graduate School of Biomedical Sciences, Houston, Texas 77030. Electronic address: dyu@mdanderson.org.
Michael W Van DykeDepartment of Chemistry and Physics, Western Carolina University, Cullowhee, North Carolina 28723.
The University of Texas MD Anderson Cancer Center · USWestern Carolina University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

MicroRNAs (miRNA) are endogenous, short, non-coding RNA that undergo a multistep biogenesis before generating the functional, mature sequence. The core components of the microprocessor complex, consisting of Drosha and DGCR8, are both necessary and sufficient for this process, although accessory proteins have been found that modulate the biogenesis of a subset of miRNA. Curiously, many of the proteins involved in miRNA biogenesis are also needed for ribosomal RNA processing. Here we show that nucleolin, another protein critical for rRNA processing, is involved in the biogenesis of microRNA 15a/16 (miR-15a/16), specifically at the primary to precursor stage of processing. Through overexpression and knockdown studies, we show that miR-15a/16 levels are directly correlated to nucleolin expression. Furthermore, we found that cellular localization is critical for the proper functioning of nucleolin in this pathway and that nucleolin directly interacts with DGCR8 and Drosha in the nucleus. Nucleolin can bind to the primary miRNA both directly and specifically. Finally, we show that in the absence of nucleolin, cell extracts are unable to process miR-15a/16 in vitro and that this can be rescued by the addition of nucleolin. Our findings offer a new protein component in the microRNA biogenesis pathway and lend insight into miRNA dysregulation in certain cancers.

Indexed as

Cell Line, TumorCell NucleolusGene Expression RegulationHEK293 CellsHumansMicroRNAsNucleolinPhosphoproteinsProtein BindingProto-Oncogene Proteins c-bcl-2RNARNA-Binding ProteinsRNA, RibosomalSignal TransductionSubcellular FractionsMicroRNAsMIRN15 microRNA, humanMIRN16 microRNA, humanNucleolinPhosphoproteinsProto-Oncogene Proteins c-bcl-2RNARNA-Binding ProteinsRNA, Ribosomal

Identifiers

PMID22049078
PMCPMC3243533
OpenAlexW1968035106

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.