Evidence map›Paper›PMID 22047049›Full record

ArticleBiochemistry2011

Mössbauer and EPR study of iron in vacuoles from fermenting Saccharomyces cerevisiae.

Allison L Cockrell, Gregory P Holmes-Hampton, Sean P McCormick, Mrinmoy Chakrabarti, Paul A Lindahl

Abstract read
In one paragraph

Article in Biochemistry, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 43 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Labile Iron Pool of IsolatedJournal of the American Chemical Society · 2023
    Article
  5. Article
  6. Article
  7. In vitro inhibition of Saccharomyces cerevisiae growth by Metschnikowia spp. triggered by fast removal of iron via two ways.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2020
    Article
  8. Article
  9. Review
  10. Candida albicans reprioritizes metal handling during fluconazole stress.Metallomics : integrated biometal science · 2019
    Article
  11. Article
  12. Article
  13. Article
  14. Contribution of Mössbauer spectroscopy to the investigation of Fe/S biogenesis.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2018
    Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Allison L CockrellDepartment of Biochemistry and Biophysics, Texas A&M University, College Station, Texas 77843-2128, United States.
Gregory P Holmes-Hampton
Sean P McCormick
Mrinmoy Chakrabarti
Paul A Lindahl
Texas A&M University · US

Funding

Iron in Mitochondrial Physiology and DiseaseR01GM084266 · NIGMS · TEXAS A&M UNIVERSITY · PI LINDAHL, PAUL A. · 2009 to 2017
$2.3M
NIGMS NIH HHS GM084266NIGMS NIH HHS R01 GM084266
6 · The paper itself

Abstract

Vacuoles were isolated from fermenting yeast cells grown on minimal medium supplemented with 40 μM (57)Fe. Absolute concentrations of Fe, Cu, Zn, Mn, Ca, and P in isolated vacuoles were determined by ICP-MS. Mössbauer spectra of isolated vacuoles were dominated by two spectral features: a mononuclear magnetically isolated high-spin (HS) Fe(III) species coordinated primarily by hard/ionic (mostly or exclusively oxygen) ligands and superparamagnetic Fe(III) oxyhydroxo nanoparticles. EPR spectra of isolated vacuoles exhibited a g(ave) ~ 4.3 signal typical of HS Fe(III) with E/D ~ 1/3. Chemical reduction of the HS Fe(III) species was possible, affording a Mössbauer quadrupole doublet with parameters consistent with O/N ligation. Vacuolar spectral features were present in whole fermenting yeast cells; however, quantitative comparisons indicated that Fe leaches out of vacuoles during isolation. The in vivo vacuolar Fe concentration was estimated to be ~1.2 mM while the Fe concentration of isolated vacuoles was ~220 μM. Mössbauer analysis of Fe(III) polyphosphate exhibited properties similar to those of vacuolar Fe. At the vacuolar pH of 5, Fe(III) polyphosphate was magnetically isolated, while at pH 7, it formed nanoparticles. This pH-dependent conversion was reversible. Fe(III) polyphosphate could also be reduced to the Fe(II) state, affording similar Mössbauer parameters to that of reduced vacuolar Fe. These results are insufficient to identify the exact coordination environment of the Fe(III) species in vacuoles, but they suggest a complex closely related to Fe(III) polyphosphate. A model for Fe trafficking into/out of yeast vacuoles is proposed.

Indexed as

Biological TransportElectron Spin Resonance SpectroscopyFerric CompoundsIronSaccharomyces cerevisiaeSpectroscopy, MossbauerVacuolesFerric CompoundsIron

Identifiers

PMID22047049
PMCPMC3226750
OpenAlexW1974658584

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.