Evidence map›Paper›PMID 22046136›Full record

ArticlePLoS pathogens2011

Coordinated destruction of cellular messages in translation complexes by the gammaherpesvirus host shutoff factor and the mammalian exonuclease Xrn1.

Sergio Covarrubias, Marta M Gaglia, G Renuka Kumar, Wesley Wong, Andrew O Jackson, Britt A Glaunsinger

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 65 papers.

0numbers the graph read from it
0cells of the map it votes in
65citing papers in PubMed
3.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

65 citing papers in PubMed, 96 citations in OpenAlex.

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  13. The mProceedings of the National Academy of Sciences of the United States of America · 2022
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5 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Sergio CovarrubiasDivision of Infectious Diseases and Immunity, School of Public Health, University of California Berkeley, Berkeley, California, United States of America.
Marta M Gaglia
G Renuka Kumar
Wesley Wong
Andrew O Jackson
Britt A Glaunsinger
University of California, Berkeley · US

Funding

Disruption of Cellular RNA Processing by Kaposi's Sarcoma-Associated HerpesvirusR01CA136367 · NCI · UNIVERSITY OF CALIFORNIA BERKELEY · PI Britt A Glaunsinger · 2010 to 2026
$5.8M
TRAINING IN INFECTIOUS DISEASES AND IMMUNITY RESEARCH (T32 AI007620)T32AI007620 · NIAID · UNIVERSITY OF CALIFORNIA BERKELEY · PI RILEY, LEE W · 2000 to 2010
$1.2M
NCI NIH HHS R01 CA136367NCI NIH HHS R01CA136367NIAID NIH HHS 5 T32 AI007620NIAID NIH HHS T32 AI007620
6 · The paper itself

Abstract

Several viruses encode factors that promote host mRNA degradation to silence gene expression. It is unclear, however, whether cellular mRNA turnover pathways are engaged to assist in this process. In Kaposi's sarcoma-associated herpesvirus this phenotype is enacted by the host shutoff factor SOX. Here we show that SOX-induced mRNA turnover is a two-step process, in which mRNAs are first cleaved internally by SOX itself then degraded by the cellular exonuclease Xrn1. SOX therefore bypasses the regulatory steps of deadenylation and decapping normally required for Xrn1 activation. SOX is likely recruited to translating mRNAs, as it cosediments with translation initiation complexes and depletes polysomes. Cleaved mRNA intermediates accumulate in the 40S fraction, indicating that recognition occurs at an early stage of translation. This is the first example of a viral protein commandeering cellular mRNA turnover pathways to destroy host mRNAs, and suggests that Xrn1 is poised to deplete messages undergoing translation in mammalian cells.

Indexed as

AnimalsExoribonucleasesGene Expression Regulation, ViralHerpesvirus 8, HumanHLA-DR AntigensHost-Pathogen InteractionsHumansMembrane GlycoproteinsMiceMicrotubule-Associated ProteinsRibonucleasesRNA, MessengerSOX Transcription FactorsViral ProteinsVirionExoribonucleasesHLA-DR AntigensMembrane GlycoproteinsMicrotubule-Associated ProteinsRibonucleasesRNA, MessengerSOX Transcription FactorsViral Proteinsvirion host shutoff protein, SimplexvirusXM1 protein, humanXRN1 protein, human

Identifiers

PMID22046136
PMCPMC3203186
OpenAlexW2011099846

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.