Evidence map›Paper›PMID 22046132›Full record

ArticlePLoS pathogens2011

The SARS-coronavirus-host interactome: identification of cyclophilins as target for pan-coronavirus inhibitors.

Susanne Pfefferle, Julia Schöpf, Manfred Kögl, Caroline C Friedel, Marcel A Müller, Javier Carbajo-Lozoya, Thorsten Stellberger, Ekatarina von Dall'Armi, Petra Herzog, Stefan Kallies and 18 more

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 294 papers, 7 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
294citing papers in PubMed, 7 pooled it
6.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

294 citing papers in PubMed, 7 syntheses or guidelines pooled it, 432 citations in OpenAlex.

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  6. Recommendations for the management of patients with immune-mediated kidney disease during the severe acute respiratory syndrome coronavirus 2 pandemic.Nephrology, dialysis, transplantation : official publication of the European Dialysis and Transplant Association - European Renal Association · 2020
    Guideline
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234 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

28 authors at 13 institutions in 3 countries.

Susanne PfefferleBernhard-Nocht-Institute, Hamburg, Germany.
Julia Schöpf
Manfred Kögl
Caroline C Friedel
Marcel A Müller
Javier Carbajo-Lozoya
Thorsten Stellberger
Ekatarina von Dall'Armi
Petra Herzog
Stefan Kallies
Daniela Niemeyer
Vanessa Ditt
Thomas Kuri
Roland Züst
Ksenia Pumpor
Rolf Hilgenfeld
Frank Schwarz
Ralf Zimmer
Imke Steffen
Friedemann Weber
Volker Thiel
Georg Herrler
Heinz-Jürgen Thiel
Christel Schwegmann-Wessels
Stefan Pöhlmann
Jürgen Haas
Christian Drosten
Albrecht von Brunn
Ludwig-Maximilians-Universität München · DEUniversity of Bonn · DEKantonsspital St. Gallen · CHLMU Klinikum · DEMedizinische Hochschule Hannover · DEUniversity of Lübeck · DEUniversity of Veterinary Medicine Hannover, Foundation · DEBernhard Nocht Institute for Tropical Medicine · DEDKFZ-ZMBH Alliance · DEHeidelberg University · DEPhilipps University of Marburg · DEUniversity of Freiburg · DEUniversity of Giessen · DE

Funding

Medical Research Council G0501453
6 · The paper itself

Abstract

Coronaviruses (CoVs) are important human and animal pathogens that induce fatal respiratory, gastrointestinal and neurological disease. The outbreak of the severe acute respiratory syndrome (SARS) in 2002/2003 has demonstrated human vulnerability to (Coronavirus) CoV epidemics. Neither vaccines nor therapeutics are available against human and animal CoVs. Knowledge of host cell proteins that take part in pivotal virus-host interactions could define broad-spectrum antiviral targets. In this study, we used a systems biology approach employing a genome-wide yeast-two hybrid interaction screen to identify immunopilins (PPIA, PPIB, PPIH, PPIG, FKBP1A, FKBP1B) as interaction partners of the CoV non-structural protein 1 (Nsp1). These molecules modulate the Calcineurin/NFAT pathway that plays an important role in immune cell activation. Overexpression of NSP1 and infection with live SARS-CoV strongly increased signalling through the Calcineurin/NFAT pathway and enhanced the induction of interleukin 2, compatible with late-stage immunopathogenicity and long-term cytokine dysregulation as observed in severe SARS cases. Conversely, inhibition of cyclophilins by cyclosporine A (CspA) blocked the replication of CoVs of all genera, including SARS-CoV, human CoV-229E and -NL-63, feline CoV, as well as avian infectious bronchitis virus. Non-immunosuppressive derivatives of CspA might serve as broad-range CoV inhibitors applicable against emerging CoVs as well as ubiquitous pathogens of humans and livestock.

Indexed as

AnimalsAntiviral AgentsCaco-2 CellsChlorocebus aethiopsCyclophilinsCyclosporineHEK293 CellsHost-Pathogen InteractionsHumansJurkat CellsProtease InhibitorsProtein Interaction MappingSevere Acute Respiratory SyndromeSevere acute respiratory syndrome-related coronavirusTwo-Hybrid System TechniquesVero CellsAntiviral AgentsCyclophilinsCyclosporineProtease InhibitorsViral Proteins

Identifiers

PMID22046132
PMCPMC3203193
OpenAlexW2036693329

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.