Evidence map›Paper›PMID 22045297›Full record

ArticleEuropean journal of human genetics : EJHG2012

Novel mutation and three other sequence variants segregating with phenotype at keratoconus 13q32 susceptibility locus.

Marta Czugala, Justyna A Karolak, Dorota M Nowak, Piotr Polakowski, Jose Pitarque, Andrea Molinari, Malgorzata Rydzanicz, Bassem A Bejjani, Beatrice Y J T Yue, Jacek P Szaflik and 1 more

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In one paragraph

Article in European journal of human genetics : EJHG, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed, 1 pooled it
4.2field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 1 synthesis or guideline pooled it, 82 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 3 countries.

Marta CzugalaInstitute of Human Genetics, Polish Academy of Sciences, Strzeszynska 32,Poznan, Poland.
Justyna A Karolak
Dorota M Nowak
Piotr Polakowski
Jose Pitarque
Andrea Molinari
Malgorzata Rydzanicz
Bassem A Bejjani
Beatrice Y J T Yue
Jacek P Szaflik
Marzena Gajecka
Hospital Metropolitano · ECInstitute of Human Genetics · PLMedical University of Warsaw · PLPolish Academy of Sciences · PLSignature Analytics (United States) · USUniversity of Illinois Chicago · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Keratoconus (KTCN), a non-inflammatory corneal disorder characterized by stromal thinning, represents a major cause of corneal transplantations. Genetic and environmental factors have a role in the etiology of this complex disease. Previously reported linkage analysis revealed that chromosomal region 13q32 is likely to contain causative gene(s) for familial KTCN. Consequently, we have chosen eight positional candidate genes in this region: MBNL1, IPO5, FARP1, RNF113B, STK24, DOCK9, ZIC5 and ZIC2, and sequenced all of them in 51 individuals from Ecuadorian KTCN families and 105 matching controls. The mutation screening identified one mutation and three sequence variants showing 100% segregation under a dominant model with KTCN phenotype in one large Ecuadorian family. These substitutions were found in three different genes: c.2262A>C (p.Gln754His) and c.720+43A>G in DOCK9; c.2377-132A>C in IPO5 and c.1053+29G>C in STK24. PolyPhen analyses predicted that c.2262A>C (Gln754His) is possibly damaging for the protein function and structure. Our results suggest that c.2262A>C (p.Gln754His) mutation in DOCK9 may contribute to the KTCN phenotype in the large KTCN-014 family.

Indexed as

Genetic VariationMutationChromosomes, Human, Pair 13Eye ProteinsGenetic LinkageGenetic Predisposition to DiseaseGenotypeHumansKeratoconusPedigreePhenotypeSequence AlignmentEye Proteins

Identifiers

PMID22045297
PMCPMC3306853
OpenAlexW2011300317

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.